| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1945 |
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| Symbol | |
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| ID | 6282403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2188114 |
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| End bp | 2189337 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642621511 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_001895577 |
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| Protein GI | 187923935 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.415325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.454872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACTC TCGACGACCT CAGCCGCATG GCCGAAGCGC CGCTGCATAC GTGGCCCGGC
GCATTGATCG TCTCGGTCAT CGCGATGATG CTGGCCGTGG GCATCCATCA GATCGGCGCG
CGCATCGTGA CGCGGCTCGC GCGGCCTTAC CCGCTGACGA GCGTCGTGTT GCGCTATATC
GACAAGCCGT CGCTGTTCGT GCTCGTGATC CTCGCGCTGG AGGCGGTCTG GTGGGAAGCG
CCGGACACGC TGACCTTCAT CACGCCGCTG CGCGACGCTG CGGCGATCAC GCTGATCGGC
GGAATTACGT GGCTCTCGGT GCGCTCGGCG GCGGCGATCG GCGAAGCGAT CATTCAGGCC
CATCCGCTCG ACACCGCCGA TAACCTGCAG GCGCGCCGCA TTCATACGCA GGCGCGCGTG
CTGGCCCGTT CGGTGATGTT CGTGATCGTG ATCGTCGGCG TGGGCGGCGC GTTGATGACA
TTTCCGAGCG TCCGGCAGAT CGGTGCGAGC CTGCTGGCGT CGGCGGGCGT GGCGGGGTTG
GTCGCGGGTA TCGCGGCGCG GCCGGTGCTC GGCAATCTGA TCGCCGGCTT GCAGATCGCG
CTGTCGCAAC CGATCCGTCT CGACGACGTC GTCGTGATCC AGGGCGAGTG GGGGCGTATC
GAGGAAATCA CCGGCACGTA TGTGTCGGTG CGTCTGTGGG ATCAGCGGCG GCTGATCGTG
CCGCTGCAAT GGTTCATCGA AAACCCGTTT TCCAACTGGA CTCGCAGCAG TTCGCAGATC
ATCGGCACGG TGTTTCTCTA CGTCGACTAC CGAATGCCGC TCGCGCCGTT GCGGGAGGAA
CTCGCGCGCA TCGTCGAGGA CGCGCCCGAG TGGGACCGGC GCGTGCAGGT GCTGCAGGTC
ACGGACGGCA CCGAGCGCTC CATGCAATTG CGCGCGCTCG TCAGTTCGCT CGACTCAGGC
CTGAACTGGG ATTTGCGTTG CCGCGTGCGC GAAGGTCTGC TCGACTTCAT TCAGCAGCAC
TATCCGCAGT ACTTGCCGCG GGCGCGTGCG GAAGTGTCGG CGGAACTGGA AACCGGTAAG
GGCGAGCCGC TCGACTGGGT GCCGCGCAGC ACGCAGACGC CGGCCGGCAG CACCGCCGCG
CACACTGAGG CCGATCCGGT GGCGACACGC GCCGGACGGC AGCCGGCGGT AGGCGTGCCG
GGGCAGGCGA AGGAAAAAGT TTGA
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| Protein sequence | MPTLDDLSRM AEAPLHTWPG ALIVSVIAMM LAVGIHQIGA RIVTRLARPY PLTSVVLRYI
DKPSLFVLVI LALEAVWWEA PDTLTFITPL RDAAAITLIG GITWLSVRSA AAIGEAIIQA
HPLDTADNLQ ARRIHTQARV LARSVMFVIV IVGVGGALMT FPSVRQIGAS LLASAGVAGL
VAGIAARPVL GNLIAGLQIA LSQPIRLDDV VVIQGEWGRI EEITGTYVSV RLWDQRRLIV
PLQWFIENPF SNWTRSSSQI IGTVFLYVDY RMPLAPLREE LARIVEDAPE WDRRVQVLQV
TDGTERSMQL RALVSSLDSG LNWDLRCRVR EGLLDFIQQH YPQYLPRARA EVSAELETGK
GEPLDWVPRS TQTPAGSTAA HTEADPVATR AGRQPAVGVP GQAKEKV
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