| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1925 |
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| Symbol | |
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| ID | 6283600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2167189 |
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| End bp | 2168874 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621491 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001895557 |
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| Protein GI | 187923915 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.113828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.439232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC CGCTGCTTGG CCAGATGATG GACGTGCCGC TGACCGTGCC TTCGTTGCTC
ACCCACGCCG CGCGGCATTT CGGCAGCACC GAAATCGTGT CGCGGCGTAT CGAAGGCGAC
CTGCATCGCT ATACCTATCG TGATTGCGAG AAGCGCGCGA AGCAGCTCGC GCAAGCGCTG
ATCGCACTCG GCGTCGAACC CGGCGAACGG GTCGCGACGC TTGCGTGGAA CGGCTACCGT
CATCTGGAAG CGTATTACGG CACGACCGGT TTCGGCGCCG TGTGCCATAC GATCAATCCG
CGCCTCTTTC CCGATCAGAT CGCCTACATC ATCAATCACG CCGACGACGC CTACGTGCTG
TTCGACACCA CGTTCGCGCC GCTCGTCGAT GTCCTCGCAC CGCAATGTCC GAAGGTGCGC
GGCTGGATCG CGCTGGCCGA CGAAGCGCAT CTGCCCGCGA TGCAGACGCC CGCGCTCAGC
TACGAAACAC TCGTCACCGC GCAGGACGGA AATTACGCAT GGCCGCCGCT CGACGAACGG
CAAGCCTCGT ACCTGTGCTA CACATCCGGC ACCACGGGCA ATCCGAAGGG CGCACTGTAT
TCGCATCGTT CGACGGTGCT GCATGCGTTC GGCGCTTCAC TGCCCGACGC CATGAGTCTC
TCCGCGCGCG ACTGCGTGCT GCCCGTCGTG CCGATGTTTC ATGTGAACGC ATGGGGCATT
CCGCACGCCG CGCCGCTGAC CGGCGCGAAG CTCGTGTTCC CCGGCAAGGA CCTCGACGGC
AAGTCGCTGT ACGAATTGAT GGAGAGCGAG CGCGTTACGT ATTCGGCCGG CGTGCCGACC
GTATGGCTTG GACTGCTCAA CTATCTGCGC GAGGCGAAAG TGCGGTTTTC GTCGCTCAAT
CGAACGGTGA TCGGCGGCTC GGCCTGTCCG CCGGCCATGC TGCGCACCTT CGAAGACGAC
TACGGCGTGC AGGTGATCCA CGCGTGGGGC ATGACCGAAA TGTCGCCGCT CGGTACGCTG
TCCAAACTGA CGTGGGAACA AAGCCAGCGT CCGCTCGAAG AGCAGCGCGC GTTGCTCGAA
AAGCAGGGGC ACGTGCTGTA TGGCGTCGAC ATGAAAATCG TCGGCGAGGA TGGCCGCGAA
CTGCCTTGGG ACGGCGTGGC GTTCGGCGAT CTGCACGTGC GCGGACCGTG GGTGATCGAC
CGCTATTTCC GCAAGGACGA TTCGCCGCTC GTGGACGGCT GGTTTCCCAC CGGCGACGTC
GCCACCATCG ACCGCGACAG TTTTCTGCAT ATCACCGACC GCTCGAAAGA CGTGATCAAG
TCCGGCGGCG AGTGGATCAG TTCGATCGAC GTCGAAAACG TGGCGATCGC GCATCCGGCG
GTGGCCGAAG CGGCGTGCAT CGCGTGCGCG CATCCGAAAT GGACCGAGCG GCCGCTGCTG
GTGGTCGTCA AACGCCCCGG TTTCGAAGTC ACGCGCGAGG AACTGATCGC CTTCTACGAC
GGCAAGGTCG CGAAATGGTG GATTCCCGAC GACGTCGCGT TTGTCGACGA ATTGCCGCAC
ACGGCGACCG GCAAGCTGCA AAAACTCAAG CTGCGCGACA TATTCCGCAA CCACGTGCTG
CCTTCCGCGC TTGAAGACGA AAAAGACTGT CCGCTGACGC CGCTTGCCAG GGGAAACCCC
GCCTGA
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| Protein sequence | MTTPLLGQMM DVPLTVPSLL THAARHFGST EIVSRRIEGD LHRYTYRDCE KRAKQLAQAL
IALGVEPGER VATLAWNGYR HLEAYYGTTG FGAVCHTINP RLFPDQIAYI INHADDAYVL
FDTTFAPLVD VLAPQCPKVR GWIALADEAH LPAMQTPALS YETLVTAQDG NYAWPPLDER
QASYLCYTSG TTGNPKGALY SHRSTVLHAF GASLPDAMSL SARDCVLPVV PMFHVNAWGI
PHAAPLTGAK LVFPGKDLDG KSLYELMESE RVTYSAGVPT VWLGLLNYLR EAKVRFSSLN
RTVIGGSACP PAMLRTFEDD YGVQVIHAWG MTEMSPLGTL SKLTWEQSQR PLEEQRALLE
KQGHVLYGVD MKIVGEDGRE LPWDGVAFGD LHVRGPWVID RYFRKDDSPL VDGWFPTGDV
ATIDRDSFLH ITDRSKDVIK SGGEWISSID VENVAIAHPA VAEAACIACA HPKWTERPLL
VVVKRPGFEV TREELIAFYD GKVAKWWIPD DVAFVDELPH TATGKLQKLK LRDIFRNHVL
PSALEDEKDC PLTPLARGNP A
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