Gene Bphyt_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1892 
Symbol 
ID6284403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2125250 
End bp2125630 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content70% 
IMG OID642621456 
Producthypothetical protein 
Protein accessionYP_001895524 
Protein GI187923882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00275007 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.354275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCC AATCGACTCA TTCGCTTTTC AAGCCGCTGC CAGGCGCGCA AGGTGCGGCC 
GCCACGCAGG TCGCCATCTG GTTCAACGAC CGGCCGCTGT CCGTGCCGGC CGGCTGCTCG
GTCGCGGCGG CCCTGCTTGC GGCAGGCGTA TCGCGCTTTC GCGCGACGCC CGTGTCCGGC
GCGCCGCGCG CGCCCTTCTG CATGATGGGC GCGTGCTTCG ACTGCCTCGT CGAGATCGAC
GGCATGCCGA GCCGTCAGGC CTGCATGGTC GAAGTCACGG CCGGCATGCG CATCCGTTCG
CAGGAAGGCG CGCGCGATCT GCCGCCCTGC GGCGCGACGG ACCTCAACAA CGCCTCGCTG
GAGAGCGCCC ATGACCGCTG A
 
Protein sequence
MTTQSTHSLF KPLPGAQGAA ATQVAIWFND RPLSVPAGCS VAAALLAAGV SRFRATPVSG 
APRAPFCMMG ACFDCLVEID GMPSRQACMV EVTAGMRIRS QEGARDLPPC GATDLNNASL
ESAHDR