Gene Bphyt_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1884 
Symbol 
ID6284305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2117652 
End bp2118299 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID642621448 
Producthypothetical protein 
Protein accessionYP_001895516 
Protein GI187923874 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3194] Ureidoglycolate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0593972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAA AGATCGACTA CCTCAACCCC GCCCTGCCAG CCGGCCTGCG GCGCGTATCG 
ATGCCCGTGG TCGACGCGAC ACCGGCAACG CTCGACGGAT TTGGCCGGCT CGTGACGGAC
CCGAGCGAGT GCCCGATCGA GATCGTGCAG TGGCCGGCGG CGGGCTCGCG GCCCATCGAC
CCGGGAACCG GCGATGAGGC CGGCACCACC GAAGGCACGT TCGTGAGCGA ATGGCGCGGG
GACATTCTCT ATGGCCGCAA CGAGGCGGTG GGCGGTCACT ACGTTCTTGC GTACGCAACC
GAGCCTGAAG CCGCCCGCGA CGACAACGTC CGCAAACCGG AACGGATGCT GCTGTGGCAC
GCGAACTATC ACCCGGACGG CGGCCAACTG TTCTTTCCGC TCGACCATCG CCCGTTCTAC
GTTCCCCTGG CCTTGCCCGG CGACGACATC GCACCGGAGA AGTTCGTGTG CTTCCGCTTC
GACGGAAAGC AAGGGCTCTA CATTCATCCG AACATCTGGC ACGAAGGGGT GTTTACTCTC
GAAGGGACGC AGCGGTTCTT CGACAAGCAG GGCGCGGTCC ACGCGCGGGT CTCTGTCGAC
TTTGCCCGTG AGTTCGGCTG TCTTCTCGAA GCGCCGATCG ATCTGTAG
 
Protein sequence
MPQKIDYLNP ALPAGLRRVS MPVVDATPAT LDGFGRLVTD PSECPIEIVQ WPAAGSRPID 
PGTGDEAGTT EGTFVSEWRG DILYGRNEAV GGHYVLAYAT EPEAARDDNV RKPERMLLWH
ANYHPDGGQL FFPLDHRPFY VPLALPGDDI APEKFVCFRF DGKQGLYIHP NIWHEGVFTL
EGTQRFFDKQ GAVHARVSVD FAREFGCLLE APIDL