| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1852 |
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| Symbol | |
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| ID | 6281879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2079839 |
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| End bp | 2081023 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621415 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001895484 |
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| Protein GI | 187923842 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.133902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAT CCAAACTCCA ACGCGATCTG CAAACCCGCA TCGTGCGTGC CGAGGACCAG
CTCACGCCGG GCTTCGAGTC GTTCTCGATG CCGGTCACGC GGGCGTCGAC GGTCGTGTTC
CCCGATCTCG CCACCATGCG CGCGCTCGAC TGGAAAAACG ACGCGCAATG GCGCTACGGC
CTGCATGCCA CGCCGACTTC GCTCGCGCTG GCGCAGCGCC TTGCCACCAT CGAGGGCGGC
AATCACGCGT TGCTGCAGCC GTCCGGGCTG TCGTCGATTT CGAATGTGTA TTTCGGCCTC
GTCAAAGCTG GCGACGACGT GCTGATTCCC GATAACGTCT ATTCGCCGAA CCGCGATCAC
GGCGACTGGC TGGCGCGCGA TTTCGGTATC ACCGTGCGCT ACTACGATCC GATGATCGGC
GCGGGCATGG CCGATCTGAT CCAGCCGAAT ACGCGCCTGA TCTGGCTCGA GGCGCCCGGC
TCGGTGACGA TGGAAGTGGC CGACGTGCCT GCCATCACCG CGGCGGCGCG CGCGCGCAAC
GTCGTCACGG CGATCGACAA CACGTGGTCG GCGGGGCTCG GTTTCCGGCC GTTCGATCAC
GGCGTCGACA TCTCGGTGCA GGCGCTCACC AAGTATCAAT CGGGCGGCGG CGACGTGCTG
ATGGGCGCGA CGATCACCGT CGATCGCGAA CTGCATCTGA AGCTGAAGGC GGCGCGCATG
CGCATGGGCA TCGGCGTCTC GTCGGACGAC TGCTCGCTGA TTCTGCGCAG CTTGCCGACC
ATGCAACTGC GCTTCGAGCA GCATGACCGC TCGGCGCTCG GCCTGGCGAA ATGGCTGAAG
ACGCGGCCGG AAATTGCCGC GGTGTTGCAC CCGGCGCTCT CCGACTGTCC GGGGCATGAG
TTTTACAAGC GCGACTTCAC GGGCGCGGGC GGGCTTTTCT CCGTCGTGTT CGACGGCCGC
TACAGCCCGG CGCAAATCGA TACGTTCTGC GAGTCGCTCG AACTGTTCTC GCTCGGCTGG
AGCTGGGGTG GTGCACACAG TCTCGCGATG CCGTACGACG TCGCGTCGAT GCGGACGGCA
GGGCAGTGGC CGCACAGCGG GACCTTGGTG CGCTTCTATA TCGGCCTCGA AGCCGAGGCG
GATTTGCGTG CCGATATGGA GCAGTCTCTG GCCAGGCTGA GTTAA
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| Protein sequence | MTQSKLQRDL QTRIVRAEDQ LTPGFESFSM PVTRASTVVF PDLATMRALD WKNDAQWRYG
LHATPTSLAL AQRLATIEGG NHALLQPSGL SSISNVYFGL VKAGDDVLIP DNVYSPNRDH
GDWLARDFGI TVRYYDPMIG AGMADLIQPN TRLIWLEAPG SVTMEVADVP AITAAARARN
VVTAIDNTWS AGLGFRPFDH GVDISVQALT KYQSGGGDVL MGATITVDRE LHLKLKAARM
RMGIGVSSDD CSLILRSLPT MQLRFEQHDR SALGLAKWLK TRPEIAAVLH PALSDCPGHE
FYKRDFTGAG GLFSVVFDGR YSPAQIDTFC ESLELFSLGW SWGGAHSLAM PYDVASMRTA
GQWPHSGTLV RFYIGLEAEA DLRADMEQSL ARLS
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