Gene Bphyt_1668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1668 
Symbol 
ID6282381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1884195 
End bp1884662 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content65% 
IMG OID642621229 
Productputative lipoprotein 
Protein accessionYP_001895302 
Protein GI187923660 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4520] Surface antigen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.178246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.932385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACAT TTCATCAATT CGGCAGCGGG CTGTCTGGCG GCATAGCCTG TGTGTGCCTG 
TGCGCCGCGT GCGCGGCGCC GGTCGAGGCG CAATCGGATG CGTCTGTGTG CCGGTTCGTG
GCAGGGCAGG CGGAAATCGA CGGCGTCATG CAGCAGATCA CCGGCCGCGC GTGCCTGCAA
CCGGACGGCA CGTGGCAGAT CGTCGAGGAC GATGCCGTCG CTCAGACCCT GGCGGATGGC
CCCGTCTACT ACTACGATCC ATGGTATTGG GGGCCGCCGG TGGTGTTTGG TGTCGGCGTG
TCGTTCGTGT TCGTCGACCG CTTTCATCAT TTTCATCACA TGGATCATGT GCGCTATGTG
CATGGCGTGC ATGGATCGTT CGGCATGGGC GGGCGCGGCG GTTGGCACGG CGCGGCGCCC
ATGCACACAT GGGGCGGCAT GTCGCACGGC GGTGGAATGC GGCGGTGA
 
Protein sequence
MLTFHQFGSG LSGGIACVCL CAACAAPVEA QSDASVCRFV AGQAEIDGVM QQITGRACLQ 
PDGTWQIVED DAVAQTLADG PVYYYDPWYW GPPVVFGVGV SFVFVDRFHH FHHMDHVRYV
HGVHGSFGMG GRGGWHGAAP MHTWGGMSHG GGMRR