| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1657 |
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| Symbol | |
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| ID | 6282751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1873964 |
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| End bp | 1874974 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642621218 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001895291 |
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| Protein GI | 187923649 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.374218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCC AACAACTCCT CGCACTCGCA CTGGGTCTCG CCGCGCTCGG TTTACTGTTG
ATCGCCGGCC TGGTGCTGGC GCGCGTGGCG GCCGCCCGAC GCAGCGAACG CACGCTGCGG
CACGCACTCG ACGAGCGCGC GGTGCAAAGC GCGGCGCTCG CGGCTGCGGC GGCGCGTGGC
ACAGAGGGCG CGCAGGCTGG CGCGAAGGCA GCCGCGCGCA GCGTGCCGCC CACGGGTTTC
AAGGGCCTGC TCGAACGCTT CGCGCATACG GGGATTCGCT GGCTCGACAC GCCGTTCGGC
CGCCAGGTCG TCGCTGAAGA AGATCGCCGG CTGCTGGAGC AATGCGGTTT CGTGGATACG
CGCACGCGCG GCCTGTTTCT GCTGGCGCGG CTGGTGGGCG CGCTGGTGCT GCCGGTGCTC
GCCGGCACGC TGGCGAGCAC CCATCTGGAC GGGTCCCGTT ATGGGGCGCT GGTGATCGTC
GCCGTGATGG CGGGCTTCAT GCTGCCGAAG CTCGTGTTGC GGCGGCGTGC CGGCAAGCGC
CGTCACGCGG TGGTCGATGA GTTGCCGCTG CTGGTCGATT TGCTGCGTCT TCTGCAAGGC
GTGGGTTTGT CGCTCGATCA GAGCTTGCAG GTGGTGGTCA ACGATTTTCG CGGCATGCTG
CCCGTGCTCG CCGGCGAACT GGAAATCGCG CAGCGTCAGT TTGCCGCCGG CCGCACGCGT
GAGCAGTCGC TGAACCGGCT CGCGTCGAGT TACGACAACG AGGATCTGCG CGCGGTGGTG
CGTTTGCTGG TGCAGGTCGA CCTGCACGGC GGCGCGGTGC AGGAACCGCT CAAGCAGTTC
GGCGACCGGC TGCGCGAGGC GCGCCGCGCG ATGCTGCGCG AACGCATCGG CCGGCTCGCC
GTGAAGATGA CGGGCGTGAT GATCGTCACG CTGTTGCCCG CGTTGATGAT CGTCACAGCC
GGCCCAGGCG TGCTGGCCGT CCAGCATTCG TTGGGCAAGG TGAAGCACTA A
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| Protein sequence | MQTQQLLALA LGLAALGLLL IAGLVLARVA AARRSERTLR HALDERAVQS AALAAAAARG
TEGAQAGAKA AARSVPPTGF KGLLERFAHT GIRWLDTPFG RQVVAEEDRR LLEQCGFVDT
RTRGLFLLAR LVGALVLPVL AGTLASTHLD GSRYGALVIV AVMAGFMLPK LVLRRRAGKR
RHAVVDELPL LVDLLRLLQG VGLSLDQSLQ VVVNDFRGML PVLAGELEIA QRQFAAGRTR
EQSLNRLASS YDNEDLRAVV RLLVQVDLHG GAVQEPLKQF GDRLREARRA MLRERIGRLA
VKMTGVMIVT LLPALMIVTA GPGVLAVQHS LGKVKH
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