| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1627 |
|---|
| Symbol | |
|---|
| ID | 6283214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1832523 |
|---|
| End bp | 1833749 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642621188 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_001895261 |
|---|
| Protein GI | 187923619 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0411376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAT CGGATCTGCC TGTGCCATCC ATCCCGAACG CGCGCGATGC CGTGCGCGCG
CTGCGTCCTT CGCAGATCCG CGAAGTGGCC AACGCCGGTT TCGGCGTCGC CGACGTGCTG
CCGTTCTGGT TCGGCGAATC CGACCGCGTC ACGCCGGCCT TCATCCGCGA CGCCGCTAGC
GCATCGCTCG CGGCCGGCGC GACGTTCTAC ACGCACAATC TTGGCATCGC ACCGCTGCGC
GCCGCGCTGG CGGGCTATGT CAGCGAACTG CACGGCGCGA CGTCGGCGGA GCACATCGCG
GTCACGAGCG CGGGCGTCAA TGCGCTGATG CTCGCGGCGC AACTCGTGGT GGGCGCGGGC
GACCGCGTCG TCGCGGTGAC GCCGCTCTGG CCGAATCTGG TCGAGATTCC GAAAATTCTC
GGCGCGCATG TCGAAACGGT CGCGCTGGGC TACGGCGAGC GCGGCTGGCA ACTCGACCTG
GAGCAACTGC TAGCAGCGCT GACGCCCGGC ACGAAAATGC TGCTGATCAA TTCACCGAAC
AATCCGACCG GCTGGGTGAT GAGCCGCGAT GAGCAGCGGG CCGTGCTGGC GCATTGCCGG
CGCCACGGCA TCTGGATCGT GGCGGACGAA GTCTACGAGC GCCTCTACTA TGCGGACGCC
AAGCCCGGCG CGGCCGCCGC ACCCTCGCGC ACGGCGCCGT CGTTCCTCGA TCTGGCCAGC
CGCGACGAGC GCGTGATCTG CGTCAATTCG TTTTCGAAAG CATGGTTGAT GACCGGCTGG
CGGCTTGGCT GGATCGTCGC GCCGGCCTCG TTGATGGACG ATCTGGGCAA GCTCGTCGAG
TACAACACTT CGTGCGCGCC GGCCTTCGTG CAGCAGGCGG GCATCGCGGC CGTCGAGCAG
GGCGAGCGCT TTACGCAAGA ACTGGTGCGC GACCTGAAGG CGTCGCGCGA CCATCTGGTG
CGCGCACTCG CCGCGGTGCC CGGCGTCGAT GTGAAGGTGC CGCCCGGCGC GATGTACCTG
TTTTTCTCGA TGCCGGGCGC CTCGCGCAGC CTGGAGCTTT GCAAGGCGAT GGTGCGTGAC
GTCGGGCTCG GCGTGGCGCC GGGCAGCGCG TTCGGTCCGC AAGGCGAGGG CTTCGTGCGC
TGGTGCTACG CCTGCGACAC CGCGCGGCTG GACGCGGGCG TCGAGCGCCT GAAGCGCTTC
CTTTCGCAGC CCGCAACGGC CCAATGA
|
|---|
| Protein sequence | MSESDLPVPS IPNARDAVRA LRPSQIREVA NAGFGVADVL PFWFGESDRV TPAFIRDAAS
ASLAAGATFY THNLGIAPLR AALAGYVSEL HGATSAEHIA VTSAGVNALM LAAQLVVGAG
DRVVAVTPLW PNLVEIPKIL GAHVETVALG YGERGWQLDL EQLLAALTPG TKMLLINSPN
NPTGWVMSRD EQRAVLAHCR RHGIWIVADE VYERLYYADA KPGAAAAPSR TAPSFLDLAS
RDERVICVNS FSKAWLMTGW RLGWIVAPAS LMDDLGKLVE YNTSCAPAFV QQAGIAAVEQ
GERFTQELVR DLKASRDHLV RALAAVPGVD VKVPPGAMYL FFSMPGASRS LELCKAMVRD
VGLGVAPGSA FGPQGEGFVR WCYACDTARL DAGVERLKRF LSQPATAQ
|
|---|
| |