| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1583 |
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| Symbol | |
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| ID | 6280768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1783066 |
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| End bp | 1784400 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642621145 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001895218 |
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| Protein GI | 187923576 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.185074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGAATC CAGATACGAG CGACCTTGAG TCCGAGTACG AGGCGTTGCT CTCTTTCATG
TATCTGTCCC CCGTCGGGAT TATCCGCAGC GACCTTGCGG GCTTTGTGGA CATGTTGAAT
CCACTTGCCG CGCAGCTTCT CATGCCTCTT GTCAAAGACG GCGGTATCGA GAATATCTTC
GACAGCCTCG CGTCAGTGGC GCCAGAGCTT CGCAATCTGG TGGCTAGCTT TGAGGGCGAG
CGGGGGGCAG TGTGTGAAAA CCACCGGGTG TTTGTGACAC CAGCGAGGGA TGGAGCGGTC
GTCCTCGCAT GTTCCATCAT TAAGGTCGGT GCAAATCTGT TGATGACAGT GCTAACAGAC
ATTTCCCGAC AGGTCGCCGC TGAGCGTCGC GCACGGCAGA CAGAGTCATG GCTCGCCGGA
ATCTACACGA GTGTCAACGA CTTTGCTTTC TTTTCGCTTG ATGCTGAAGG GCGCATCGAA
AGCTGGAATC CATCCGTTGA ACGCTTGACC GGTTTTGACG AGACAGATGT CGTTGGGCAC
ACGCTCTCTC GTTTTTATGC CCGCGACGAG ATTGTCTTGC ACCGTTCACC TGAGCATATC
GCGCTAACAC GTGACGAAGG TTGGCATGTG GAGGAGTTCT GGTGTGATAC GAAGACCGGT
CGGCGTTACT GGGGGCAAGT TCTCATCGCA GTGCTCCGCG AGGAGGGAGA TGACATTTCA
GGCTATTCGG TGGTCCTGAG AGACGTGACG GAGCGCAAGG TAAGCAGCGA TAACCTCGCG
CGTCTACTTA CGACCGACCA TCTGACTGGC GTATCGAGCC GAGCCCACTT TTTTGAAATT
GCGGAGGCCG AGGTGGCACG TGCCGAACGG CACGGCCGTG CATTGTCGGT CGTTATGCTG
GACGCGGATT ACTTCAAGCG TATCAACGAC ACGGCCGGGC ACCAAGCGGG TGACGAGGTT
TTGAAACGCA TCGCTGGCGA AGCAAAGGGA CTGTTACGAA CGTCCGACAC GGTGGCGAGG
CTCGGCGGCG AGGAATTCAT TCTGATGCTG CCGTCTACGA CGACCAGCGA GGCGGTGGCG
GTCGCCGAGC GATTGCGCGT TGCGGTCGAG CGGGCACGAA TCGACACTGC GGTCGGGACA
TTGAAAGCGA CAGTGAGTCT TGGCGTCGCA ACCGTAAGCA CCGCAAACCC GACGCTGCAG
AGCTTGCTAG CCGCTGCTGA CCGCGCACTT TATGACGCGA AAAGAGCAGG GCGAAACTGC
GTGCGCGGAG AGATGTTGAA TTCAATGGAC GTTTCCTGTT CTCCCTGCGA AGAAGGTAGT
ATGGGTCAAA ACTGA
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| Protein sequence | MVNPDTSDLE SEYEALLSFM YLSPVGIIRS DLAGFVDMLN PLAAQLLMPL VKDGGIENIF
DSLASVAPEL RNLVASFEGE RGAVCENHRV FVTPARDGAV VLACSIIKVG ANLLMTVLTD
ISRQVAAERR ARQTESWLAG IYTSVNDFAF FSLDAEGRIE SWNPSVERLT GFDETDVVGH
TLSRFYARDE IVLHRSPEHI ALTRDEGWHV EEFWCDTKTG RRYWGQVLIA VLREEGDDIS
GYSVVLRDVT ERKVSSDNLA RLLTTDHLTG VSSRAHFFEI AEAEVARAER HGRALSVVML
DADYFKRIND TAGHQAGDEV LKRIAGEAKG LLRTSDTVAR LGGEEFILML PSTTTSEAVA
VAERLRVAVE RARIDTAVGT LKATVSLGVA TVSTANPTLQ SLLAAADRAL YDAKRAGRNC
VRGEMLNSMD VSCSPCEEGS MGQN
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