| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1565 |
|---|
| Symbol | |
|---|
| ID | 6281830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1758487 |
|---|
| End bp | 1759395 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642621129 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001895202 |
|---|
| Protein GI | 187923560 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCAA AAACGCAATA CGAACTGACT TCGGCGGATA CGCAGACCAT TCTCGCGCTG
GTGCGCGCCG GCACGCTGGC GGAAGCCGCG CTGCGTCTGG GTATCGACGC CTCGACCATC
TTTCGCTCGG TGCAGCGGAT CGAACGCGGG TTGGGACAGC GTTTGTTCGA GCGCTCGCGC
AGCGGCTATC GCGCCACGCC GCTCGGCGCG CAACTGGCGC GTCACGCCGA GCGCATTGAG
AGCGAACTGG CGGCGGCGCG CTCCACGGTG CAGGCGAGCA GCGACCGCGT GTCCGGCAGC
GTTCATGTGA CGACCACCGA TACCGTGCTC TACGGTCTGC TGTTACCCGC GCTGCGCGAT
TTCGCGGCGC TGCATCCGGC GTTGTCGTTC GAGCTGACGG CGACCAACAG TCTCGCGAGC
CTCACCAAAC GCGACGCCGA TATCGCCGTG CGCGCCACGC GCCGCGCGCC GGATCATCTG
GTCGGCAAGC ACGTGGGTCC GCTGCGTATC GCGGTATTCG CCGCGAAAAG CAGCGGCATT
CACGCGACCG ATGTCGATGC GCTGGCGCGT TGCGACTGGG CGGCCCCGGA CGCCTCGCTC
GGCGATCACC CTTCGGTGCT GTGGCGCAAG CGTCATTGCC CGATAGTCGA GCCGCGCTAC
AAGACCAACA GCGTGATGGC GGTGTTCGAA CTCGTGGTGC GCGGTTTTGG CGTCGGCATC
TTTCCGACCT TTCTCGCGCG CGGCCGCGAC GATCTCGTGC AATTGACGCC GCCGCTCGAC
GAAGCCGAGT CGCAGGTGTG GGTGCTCGCG CATCCGGAGT CGCGTCATTT GCCGCATGTG
GCTGCCGTCT ATACGCATCT GTCGCAGCAG CTCAGCGGCG ATTATGCAGC GGGCGACGGC
GCACGCTAA
|
|---|
| Protein sequence | MRAKTQYELT SADTQTILAL VRAGTLAEAA LRLGIDASTI FRSVQRIERG LGQRLFERSR
SGYRATPLGA QLARHAERIE SELAAARSTV QASSDRVSGS VHVTTTDTVL YGLLLPALRD
FAALHPALSF ELTATNSLAS LTKRDADIAV RATRRAPDHL VGKHVGPLRI AVFAAKSSGI
HATDVDALAR CDWAAPDASL GDHPSVLWRK RHCPIVEPRY KTNSVMAVFE LVVRGFGVGI
FPTFLARGRD DLVQLTPPLD EAESQVWVLA HPESRHLPHV AAVYTHLSQQ LSGDYAAGDG
AR
|
|---|
| |