| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1519 |
|---|
| Symbol | |
|---|
| ID | 6283798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1705120 |
|---|
| End bp | 1706292 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642621084 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001895157 |
|---|
| Protein GI | 187923515 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACCA TGGCCATTCC GGCGGGCATC GCCGAACTCG AAGACGAAAT GATCGCGCTG
CGCCGCCAGA TCCACGCGCA TCCCGAGCTG GCTTATGAAG AGTTCGCTAC CGGCGACCTG
GTCGCCGAAC GCCTGCAGGA GTGGGGCTAC ACCGTGCATC GCGGGCTGGG TCAGACGGGC
GTTGTCGGTC AATTGAAAGT GGGCAACGGC ACACGCAAGC TCGGGCTGCG CGCCGACATG
GACGCGCTGC CGATTCATGA AACCACCGGC CTGCCGTACG CGAGCAAACT GCCCGGCAAG
ATGCACGCAT GCGGTCACGA CGGGCACACG GCCATGCTGC TCGCCGCCGC CAAACATCTG
GCGCAGGAAA AATGCTTCGA CGGCACGTTG AATCTGATTT TCCAGCCTGC CGAAGAGGGC
CTGGCCGGCG CGAAAAAAAT GCTCGAGGAC GGCCTGTTCG ACAAGTTTCC GTGCGACGCG
GTGTTCGCGA TGCATAACAT GCCGGGCTAT CCGGCCGGCA AGTTCGGCTT CCTGCCTGGC
TCGTTCATGG CTTCGTCGGA TACGGTGATC ATCAAGGTGA CCGGGCGCGG TGGTCATGGC
GCGGTGCCGC ACAAGGCCGT CGATCCGGTG GTGGTGTGCG CGCAGATCGT GCTGGCCTTG
CAGTCCATCG TGTCGCGCAA TATCGCGCCG CTCGACATGG CGATCATCAC CGTCGGCGCC
ATTCACGCGG GCGAAGCGCC GAACGTGATT CCCGAGACCG CCGAGATGCG CCTCTCGGTG
CGCGCATTGA AACCTGAGGT TCGCGATTAT TTGCAGGAAC GCATCACGGC GGTGGCGTGC
GGGCAAGCGG CCGTGTTCGG CGCGCGTGCG GACGTGGACT ATCAGCGTCG CTATCCGGTG
CTCGTCAACG ATCCGGCCAT GACCGGGCTC GCGCGGCAAG TCGCGCTCGA CTGGCTCGGC
GACGATGGCC TGATTGCCGA CATGCAACCG CTCACCGGCA GCGAAGACTT CGCGTTCCTG
CTCGAGCGTT GCGCTGGCAG TTACCTGATC ATCGGCAATG GCGACGGCGA GGGCGGCTGC
ATGGTTCACA ACCCTGGCTA CGATTTCAAC GACGATTGCC TCGCCACCGG CGCCGCCTAC
TGGGTGAGAC TCGCGCAGAC GTTTCTGGCC TGA
|
|---|
| Protein sequence | MNTMAIPAGI AELEDEMIAL RRQIHAHPEL AYEEFATGDL VAERLQEWGY TVHRGLGQTG
VVGQLKVGNG TRKLGLRADM DALPIHETTG LPYASKLPGK MHACGHDGHT AMLLAAAKHL
AQEKCFDGTL NLIFQPAEEG LAGAKKMLED GLFDKFPCDA VFAMHNMPGY PAGKFGFLPG
SFMASSDTVI IKVTGRGGHG AVPHKAVDPV VVCAQIVLAL QSIVSRNIAP LDMAIITVGA
IHAGEAPNVI PETAEMRLSV RALKPEVRDY LQERITAVAC GQAAVFGARA DVDYQRRYPV
LVNDPAMTGL ARQVALDWLG DDGLIADMQP LTGSEDFAFL LERCAGSYLI IGNGDGEGGC
MVHNPGYDFN DDCLATGAAY WVRLAQTFLA
|
|---|
| |