Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1496 |
Symbol | |
ID | 6282207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1678455 |
End bp | 1680107 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642621061 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001895134 |
Protein GI | 187923492 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.157519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAG AACTCCCGAT CCGCCGTGCC GCCGATGCCG ATGTCTGCCT GTTGCTCGAA GGCACGTTCC CGTTTGTGCG TGGCGGCGTG TCGAGCTGGG TCAATGAAAT GATCCGCTCC TACCCGGAGA CCCGCTTCGC GATTGTGTTC ATCGGCAGCC GGGAACAGGA CTACAACGGC GCCGCGTATG TGTTGCCGGA TAACGTGGTG CATATCGAAA CGCACTTCCT GTACGAACAG GCCGTGGCGG ATTTCCAGCC GCGCGCCGTT GCCGGCGACG CCGCGGCGTT CGCGCGCTCG CAGAAATTGC ACGACGCCTT GCGCGATCCG CGCAGCGGGC TGGATGTCGG CGGTCTGATG GCGAGCATGA TTCCGATGCT TGGGGCGAAT GGCGCATTGA ACGAGCAACA GTTCCTGTCG AGCCGCGCGG CGTGGGACAC GATCGTCGAT CAGTATCAGA AGTACTGTAC CGATCCGTCG TTCACCGATT ATTTCTGGAC CGTGCGCATC ATGCACAAGC CGCTGTGGCA ACTCGCGCGT GTCGCGGAGA AGCTATTGCC GGCGAAGGTC TATCACACCG TATCGACGGG ATACGGCGGC TTTCTCGGCG CGTTGATGCA TTACCGCACG GGTCGTCCGC TGCTCATCTC CGAGCACGGC ATCTACACGA AAGAGCGCAA GATCGACCTG CTGCAAAGCC AGTGGATTCG CGACAACCGC GGCGTGTTCG AGCGCGATAT CTCGCGCGTA AGCTATTTCC GCGAACTGTG GGTGCGTTTC TTCGAAGCGA TCGGCAAGCT CGCCTACGAC GCCGCTGACG ATATCGTCGC GTTGTACGAG GCGAACCGCC AGCGTCAGAT CACGGACGGC GCGCGCGCCG AGCGTACGCA ATGCATTCCG AACGGCATCG ACGTCGACGC GCTCGGGCCG CTGGTGGCGC AACGCAAGCC GCGTTCGCAC CGCGTGGTCG CGCTGATTGG CCGCGTGGTG CCGATCAAGG ACATCAAGAC CTTTATTCGC GCGATCTTCA TTGCGTCGCG CACCATGCCG GATCTCGAAG GCTGGATCAT CGGACCGGAA GAGGAAGATC CCGCTTACGC GCTCGAATGC CGCGCGCTCG TGGAGAGTCT CGGCCTGAGC CGCAATGTGA AGTTCCTTGG CTTCCAGCGC ATCGACGACA TGATGCCGCA AATCGACGTG ATCGCGCTGA CCTCGATCAG CGAGGCGCTG CCGCTGGTGG TGCTGGAAGG TTTCGCGGCC GGCGTGCCGG CCATCACGAC CGACGTGGGC TCGTGCCGTC AACTGATCGA AGGCGTGGAT GCGGAAGATC GCGCGCTCGG CTCCGCGGGC GCGGTGGTTC AGCTCGCCGA CCCGGCGGCC TTCGCACAGG CGGTTTTGGC GCTGCTCGCC GACGAAACCC GCTGGCAGGC CGCGCAGCAG GCCGGACTCG CGCGCGTGCG CCGCTACTAC ACCAAGAAGC AGATGATCGA CCGCTATCGC GCGCTGTATG AGCGTCTCGC CGCGATGCCG GATCGCGAGC GCAACTATTC GGCCGCCGAT GCGGCGCGCT GCCCGATGCA TCACGGCACT CAATCAAAAG CGGAGCCGCA CGCGAGTCCG GCACATCCCG TTCAATCGCA GGAGACACGC TGA
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Protein sequence | MMKELPIRRA ADADVCLLLE GTFPFVRGGV SSWVNEMIRS YPETRFAIVF IGSREQDYNG AAYVLPDNVV HIETHFLYEQ AVADFQPRAV AGDAAAFARS QKLHDALRDP RSGLDVGGLM ASMIPMLGAN GALNEQQFLS SRAAWDTIVD QYQKYCTDPS FTDYFWTVRI MHKPLWQLAR VAEKLLPAKV YHTVSTGYGG FLGALMHYRT GRPLLISEHG IYTKERKIDL LQSQWIRDNR GVFERDISRV SYFRELWVRF FEAIGKLAYD AADDIVALYE ANRQRQITDG ARAERTQCIP NGIDVDALGP LVAQRKPRSH RVVALIGRVV PIKDIKTFIR AIFIASRTMP DLEGWIIGPE EEDPAYALEC RALVESLGLS RNVKFLGFQR IDDMMPQIDV IALTSISEAL PLVVLEGFAA GVPAITTDVG SCRQLIEGVD AEDRALGSAG AVVQLADPAA FAQAVLALLA DETRWQAAQQ AGLARVRRYY TKKQMIDRYR ALYERLAAMP DRERNYSAAD AARCPMHHGT QSKAEPHASP AHPVQSQETR
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