Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1446 |
Symbol | |
ID | 6281700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1619642 |
End bp | 1620217 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642621012 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_001895085 |
Protein GI | 187923443 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTTGC CACTCAATAA CAAGGCACAT GTTGCAATCT CTATAGGAAG CAAAATCCGC GCGCTGCGCC AACGGCTCAG TCGCACGCTG GATGAAGTGG CAACGACCGC AGGCATTTCC AAGCCGTTTT TGTCGCAGGT GGAACGGGGT CATGCAACAC CTTCGATTAC GTCGCTAGTC GGTATTGCGC GAGCTTTGGG TGTGACGGTG CAGTATTTCG TCGACACGCC GACAGAAGAT AAGTCGGTGC GTCGAGGAAG CGAGTTGAAG TACTTCGGAT TTGACGGAAC CGCCAATCTG TTCGGAAGGC TGACGAACCT GTCGGTCGGC GGCAAGCTGG AAGTGATCCT CGTCAGGATG CCGGTGGGGC AGAACCCGTC GGAAGTCACA ACGCACGCCG GTGAAGAATT CTTGTATGTG ATGAGCGGCC AGATCTCGCT CACTCTGGAA GGCACGACGT TCGTATTGCA GGCAGGCGAC ACGGCGCATT ACGAGTCTAC CGTGCCGCAC TCCTGGTCCA ATACCGCGCG TGAAGAGGCG GTGGTCGTGT GGGTCGGGAC GCCAAGACTG TTTTAG
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Protein sequence | MVLPLNNKAH VAISIGSKIR ALRQRLSRTL DEVATTAGIS KPFLSQVERG HATPSITSLV GIARALGVTV QYFVDTPTED KSVRRGSELK YFGFDGTANL FGRLTNLSVG GKLEVILVRM PVGQNPSEVT THAGEEFLYV MSGQISLTLE GTTFVLQAGD TAHYESTVPH SWSNTAREEA VVVWVGTPRL F
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