Gene Bphyt_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1446 
Symbol 
ID6281700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1619642 
End bp1620217 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content57% 
IMG OID642621012 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001895085 
Protein GI187923443 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTTGC CACTCAATAA CAAGGCACAT GTTGCAATCT CTATAGGAAG CAAAATCCGC 
GCGCTGCGCC AACGGCTCAG TCGCACGCTG GATGAAGTGG CAACGACCGC AGGCATTTCC
AAGCCGTTTT TGTCGCAGGT GGAACGGGGT CATGCAACAC CTTCGATTAC GTCGCTAGTC
GGTATTGCGC GAGCTTTGGG TGTGACGGTG CAGTATTTCG TCGACACGCC GACAGAAGAT
AAGTCGGTGC GTCGAGGAAG CGAGTTGAAG TACTTCGGAT TTGACGGAAC CGCCAATCTG
TTCGGAAGGC TGACGAACCT GTCGGTCGGC GGCAAGCTGG AAGTGATCCT CGTCAGGATG
CCGGTGGGGC AGAACCCGTC GGAAGTCACA ACGCACGCCG GTGAAGAATT CTTGTATGTG
ATGAGCGGCC AGATCTCGCT CACTCTGGAA GGCACGACGT TCGTATTGCA GGCAGGCGAC
ACGGCGCATT ACGAGTCTAC CGTGCCGCAC TCCTGGTCCA ATACCGCGCG TGAAGAGGCG
GTGGTCGTGT GGGTCGGGAC GCCAAGACTG TTTTAG
 
Protein sequence
MVLPLNNKAH VAISIGSKIR ALRQRLSRTL DEVATTAGIS KPFLSQVERG HATPSITSLV 
GIARALGVTV QYFVDTPTED KSVRRGSELK YFGFDGTANL FGRLTNLSVG GKLEVILVRM
PVGQNPSEVT THAGEEFLYV MSGQISLTLE GTTFVLQAGD TAHYESTVPH SWSNTAREEA
VVVWVGTPRL F