Gene Bphyt_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1218 
Symbol 
ID6284614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1363518 
End bp1365326 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content69% 
IMG OID642620777 
Producthypothetical protein 
Protein accessionYP_001894857 
Protein GI187923215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT CCGCTCTGGC AGTACCTTCC GATTCCGTTC ATCTCCTGTG GTCCATCTTG 
CGCGAGCAAG GTTTCGATGC CGCCGCGCGT CGCGCAGTCG AATTCGCCGT GGCAGGCGGG
ACGCCGCAGC TACACGCCGA CCTGTGCACG AGCGCGGGGC GTTTCGAAGA GGCGTATCAC
AGCGCGTCGC AAGCACAAGC GTGCGCGAAC GGAGCGCGCC ATGCGCGGGT CGCGCTGTTC
GCCGACGCGC TTGGCTACGC CAGCGCCGCG CAGCGCAACA GCGAGCGGGC GGTGGCCACG
CAGCCGGTCG AGACGACGAT CGACTGGGTC GCGTGGCTGA TCGGCACGTG CGGCGCGCAC
TCCGCGGCCG CGCGAATCCT GCGTGCTTAC GAGCGTCGGG CGCCGCGGGA CGCGCGCGCG
CCGTGGTGGT TGTCGATCGC GTTGGCGGCG CTGCCTGAGG CGAGTGCGCG GGACGAGCGT
CGCGCGGCGC TGTCGCGGGC GTATGCGCTC GACCCCGCGA TCGATCCGGC GTTGCCGTTG
CAACTCGTGC TGGCATTCCG GGAGGTGCGC GATTGGCCGA CGGTCGAGCG TATCTGCCGC
GAAGGTCTTG CGCGCAATCC CGCGGATGCG GAGATGGCGT GGCAACTCAG CCACGCGCAA
TGGCAGTGCA ACGACGCAGC CGCGGCGGAG GCCACCATGC GCGCCGTGGA CGCCGTCGCG
CCCGGCAATG CGGACGTGCT GGCGGCGGTC GGCATGTATC TGAACGAGCA GGCGCGCTAT
GCGAACAGCG AGGCGGCGCT GCGAGCGGCG CTCGCGATCG ATCCGTCAGC GGTGCAGGCA
GCGGTCGATC TGGCGGACCT GGAACTGCGG CGCGGCGATT GGTCGAGCGG GTGGCCGCGT
TTTGAGGCGC GTCTCGCGCG CGAAGACCGC GAACAGAACA ACGTCGTCAG CGTAATGACA
CGTTTGTGTC CGCGCTGGCG TGGCGAAACG CTCGCCGGCA AGACCCTGGT CGTGCACAGT
GAGCAGGGCA GCGGCGACGA CATTCAGATG GTGCGTTTCG TCCCGCAGCT CGCGGCGCGT
ATGCATGACG AAGGCGGACG GCTGGTGCTT GCCGTGCGTC GCGCGTTGCA GCCGCTGTTT
GCGCGTTTCT ACGTCAATTG CGTGTCGATC GAAGAAGGCC CGCTCGGCTC GCCAGACTAC
GCGTTGCCGC TCATGAGCCT GCCGCTCGTG CTCGGTCTCG ATCCGGAGCA GGTTCACGGA
GCGCCTTACT TGCAGGCCGA TACAACGAAG GCGGCGGCTT GGCGCGAACG GATCAGCGCG
CACGCACCGG GCGCGACGTG GCATGTCGGC CTCGTCTGGT CGGGCAGCCC GACGCATCGG
CGCGACGCCA AGCGGTCGAT TCCGCTTGCA GCGCTGGCGC CGCTGCTGAC GCTTCCAGAT
GTCGTCTTCC ATCCGCTCAC GCCCGGACGC CACGCCGATG TGACGGCGCT CGCCGCGCAG
GGATATCGCC TGTGCGATCT GACTGGCGAT TACAAGGACG GCTTCGACGA CGTAGCGGCG
CATCTCACCG CGCTGAACGC GCTGGTGACG ATCGACAGCG CGCCGTTGCA TCTTGGCGGC
GCGTTAGGGC ATCGCGTGCT GGCCATGCTC GATCACGTCT CCCACTGGTC GTGGGGCAAC
GAAGAGGCGC AGCCCTGGTA CGACTCGGTC GAGCTGTTCC GGCAGCCGCA GCCTGCGCAA
TGGGCGCCGG TGGTCGAGCG GGTGGCCGCG CGTCTGAAGA CGATGCTCGC GCCGCACCAG
ACGGCCTGA
 
Protein sequence
MSDSALAVPS DSVHLLWSIL REQGFDAAAR RAVEFAVAGG TPQLHADLCT SAGRFEEAYH 
SASQAQACAN GARHARVALF ADALGYASAA QRNSERAVAT QPVETTIDWV AWLIGTCGAH
SAAARILRAY ERRAPRDARA PWWLSIALAA LPEASARDER RAALSRAYAL DPAIDPALPL
QLVLAFREVR DWPTVERICR EGLARNPADA EMAWQLSHAQ WQCNDAAAAE ATMRAVDAVA
PGNADVLAAV GMYLNEQARY ANSEAALRAA LAIDPSAVQA AVDLADLELR RGDWSSGWPR
FEARLAREDR EQNNVVSVMT RLCPRWRGET LAGKTLVVHS EQGSGDDIQM VRFVPQLAAR
MHDEGGRLVL AVRRALQPLF ARFYVNCVSI EEGPLGSPDY ALPLMSLPLV LGLDPEQVHG
APYLQADTTK AAAWRERISA HAPGATWHVG LVWSGSPTHR RDAKRSIPLA ALAPLLTLPD
VVFHPLTPGR HADVTALAAQ GYRLCDLTGD YKDGFDDVAA HLTALNALVT IDSAPLHLGG
ALGHRVLAML DHVSHWSWGN EEAQPWYDSV ELFRQPQPAQ WAPVVERVAA RLKTMLAPHQ
TA