| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1190 |
|---|
| Symbol | |
|---|
| ID | 6283191 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1330442 |
|---|
| End bp | 1333856 |
|---|
| Gene Length | 3415 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 642924390 |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0338] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00571] DNA adenine methylase (dam) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACC CTATCGTTCC ATGGACCGGC GGCAAGCGTC GGCTGGCCGA TCATCTCATC
CCGCGTTTTC CGAAGCACGA ATGCTATGTC GAGGTGTTCG CGGGCGGAGC GGCACTGTAC
TTTCTCCGGC CGCCGGCAAC TGTCGAAGTC GTCAACGATA TCAACGGGGA CCTGATCAAC
CTGTATCGGG TCGTGCAGCA CCACCTCGAG GAGTTCGTGC GCCAGTTCAA ATGGGCGCTG
ACTAGCCGGC AGGTTTTCAA ATGGCTGCAG GACACGATCC CGGAAACCCT CACCGATATC
CAGCGAGCGG CCCGCTTTTA TTACCTGCAG CACAACTGTT TTGGCGCGAA GGTTGAGGGT
CAGTCATTCG GGACGGCCAC CACAACACCA CCCGGTCTGA ACCTGCTGCG GCTCGAAGAG
ACGCTGTCGG CAGCGCACCT TCGGCTTTCC AATACGTTCC TCGAACATCT CGACTGGAAG
ACGTGCATCG ACCGGTACGA TCGGCCGCAT ACGCTGTTCT ATCTGGATCC ACCGTATTGG
CAGACGGAAG GCTACGGTGT GCCGTTTCCC TATGATGTTG CCTTTCGCCG TAAAGGAGCC
GGGTGTTTTC GGCGTAATGG CGCCAGTGAA AGGCGCCTGA TTCGGGGCTC GAACGGGGAT
CAAGAATCCT TGTTTTTACC TCCTTTCGCA AGTGCTGATT TGTTGCTCTC GGGCATCGGA
CGAGGAACGC GGTAGCTCTC GCCATCGAGC ACGACGCGGT ACGCGGCATG TCGCAGGCGA
TCAAGCGTTG CGGCGCCGAG CATCTTGTTG GTCGCGAACG CGTCCCCCCA TTCCGTAAAA
TCAAGATTGC TGGTCAGGAC GGTCGATGTA CGTTCGTACC GTTCGGCGAT CAGATCGTGG
AAGTCTTCAT CTTCGGGCGT GCGCATGGGT TTCAGTCCAA AGTCGTCAAT GATGAGCAGC
GGCACCTTGG CAAGCGCCTG GAAGCGCCGT TCGTAGGAGC CCACGGCCTG CGCGTTGCGT
AGCGCGCCGA GAAGCCGGGT CTGGGTCATG AACAGGACAT CGTGACCTTG CCGGGCGGCG
GCATGGCCCA GTGCCTGCGC CAGATGCGAC TTGCCCGTTC CGCATGGACC GGCGATCAGC
ACGCTGACCT TCTCATCGAT AAAGCGGCAG GTCGCCAGAT CATGGACGAC AGCACGATTG
AGATTGGGCA GGCGGTCGAA GTCGAAACCT TCCAGTGTCT TCTGGCCACG GAAGTTCGCG
CGGCGCATGC GGGCGTCGAG CTTTCGATGA TCGCGCCGTG CGATCTCGTC CTGGATGAGC
AACGTCAGGA AGTCGGTATA GGCGAGCTTA CGGTCGATGG CTTCACGGTT GCGCGCTTCG
AGCGTGTCCA GGATGCCGGA CAGTCGCAAT TGCTTGAGGG AAGACGTGAG TTCGGGAATT
GGATTCATGT TCAATGGATC AGGAGGGTCT GGGTATCGCG GCAGAAGCGC CCGCCGTGGG
TGTAGGTGGT CGCGCTCGAT TCAGCGGGTT CGGTCGACAG CCAGCTCTGG TCGAGGCCTT
TCTGCAGGAT CAGCTTGACG GCTTTGTAGC TTGGCGTGCC GAAATGATTC GCGCGACGGC
AGGCCGCCTC CAGGCGAGAC GCGCCGAACT GCTGGGCGAA GCGCAGCACG CCCTGTACGG
CGCGCAGCTT GATGAGAACC TGATCGCCGA AGAGTGCGTG AACAAGCGCG TGGCAGGAAG
GCCCAATACG CTGCGCTTCT CTGAGGCACC ATTGGGTGTC GTGCAGTTGC CAGGCCTGTG
CGGCTGGCGG CATGTGATCG GCCACCGTGC TACGCGTTCC CGGCGCAGTC TGCCGGACAT
GCGATGCCGA CAGTTCGTGC TCGTAGTAGA GCTGCACCAT GGTGGCGGTT GCCTTGAGCC
ACAGATCCTT ACCGGCAAGC CGGAACGGCA CGGAATAGTA GGCGCGCTGG AATTGCACAT
GGGCGTCGCG ATGGACCTTC ACGCGCGCCC AGGTTGCCAG CTCGGGCTGC ACATCGGGAA
GCGGCAGCAA CAGCGCCTGT TCGACATCTT CGAAACGCTT GAGCGGCACC TCGCGCGTCG
TGCCATGCGT GCGGGTACTG GCCTCCTGCA TCACCCAGGC TTGCGCTTGC CGGTTGGCGT
CGTCAAGATC ACGGAATTCG CGAAGAGGAA GGAAGCTCGA CTTCACGTAT TTGACGCCCG
ATTCGACAAT TCCTTTTTTA GCCGGGTCCC TCGGCGGACA AGGATCGACC TTGAACGAAT
ACCCTTCGGC GCATTGCGCG TAGGCCCGCT GGACTTCGGG TTCGTAGATA CAGGCCTTGA
CGATGGCACA CTTGGGATTG TCGATGATGA CGCGTGCGAC CACGCCGTTG AACCACTCGA
AGGCATGGCG ATGACACAGT AACCATGTGT CGACACTCTG GTCGCGGACA AATTCAACGT
ACTGATGCCG TGACCAGCAC AGCGTCATCA CGAAGAACCA CGTCTTGTGG ATCTCGCCGG
TATGCGCGTC GGTGATGGTC GGACCTGCGC CGAAATCAAC CTGTGCGGCG TCGGCAGGTT
TGAACTCCAG CCGCATTGGT ACGTCCGGCG TGAGCTCCGC CTTCAACTGC TGAAGCAGCC
TGTATACGGA TGAGTAGCTT CCTTCGTAGC CGTGGTTGCG CACCAGCGCG CCGTGAATCG
TCGTGCCGGG CACGCCCGCG TCGTGCCACT GTGCAATCTG CTCGCGCCAT GGTTCGGCTG
ACGAGATACA GCTCGCTGGC AGGAATTCCT TGCGACTAAA CGCTGTAGCG AGCTGCGTGT
CATCCGGCAG AGCGTTGCCC GGAGAAAGCC ACCCGCGTTC GGTTGCGATC TCACGCACGG
CTGCCAGCTT CTTACGGCCC ATGATCTTCG ACCGGTCGAT ATCCCGGTCG GAGTCACCCT
GGCGCATTCG CACCAGAACC TGTCGATATT GGTACATCTC GAACTTCCTC TTCAAGCCAC
CCTCCGGAGC AAATGCGTGC CGGCAGAGTA GCGGTTGGCG AAGTTCGAGC GCCCGACTCA
GACGCCAGTG GCGCCTTTAC GGCGAAAATC TACTGGCGCC TATACGCCGG AAGACTTGTG
GCGCCTAAAC GCCGAAAAGT CCCTGGCGCC TTTATGCCGA AAGCGGTTTG GCTCCTTAGC
GGCGAAAGTT CACACCTATG AGGAGTACGT CGCCATGGCG GCCCGGCTGC GTGCTCTGAA
AGGCAAAGCG ATCGTCAGCT TGAACGATCA TCCCGCGATT CGCCGCGCTT TTGAGGGCTT
CCATATTGAG ACGGTGGACA CCAAGTACAC CGTCGGCGGC GGTAGGGAAG CGGTCCGGAC
TGAGGTAATC ATTTTCAGTT GGGACGATGC GGCGGAGCCA GCTGGATTAT TTTGA
|
|---|
| Protein sequence | |
|---|
| |