| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1151 |
|---|
| Symbol | |
|---|
| ID | 6283476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1292433 |
|---|
| End bp | 1293179 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642620710 |
|---|
| Product | protein of unknown function DUF1275 |
|---|
| Protein accession | YP_001894791 |
|---|
| Protein GI | 187923149 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3619] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCA ATTATCTTCG TGGCTTTACG GCACCGGAAC GTACCGACGT GACGAACCGT
CGTTTGGGGC GTTCACTGGC GTTTGTCGCC GGGGCGGCTA ATGCGGGCGG ATTTCTGGCC
GTTGGCCAGT ACACTTCGCA CATGTCCGGG ATCGTCTCGT CGCTGGCTGA TAATGCCGTG
CTTGGCGAGG CGGGCCTCTT CGTTTCGGGG CTCAGTTCGC TTTTTTCGTT CCTTGTTGGC
GCGGCTGCGT CTGCGATCCT GATCAATTGG GGTCGCCGGC GGAATCTGCA CAGCATCTAC
GCGACACCGC TCGCGATTGA AGCCATTCTG CTGCTGTGCT TCGGGCTGCT CGGCTCGAAC
CTTGAACATC ATCGGTTTCT TTTCGTGCCT GCCACCGTCT GCGTCCTGTG CTTTGTTATG
GGTCTGCAGA ACGCGATGAT CACGAAGATT TCGCGATCGG AGATTCGTAC GACTCACGTT
ACCGGCCTGG TAACGGATGT CGGTATCGAA CTGGGCAAGA TGCTCTACTG GAATTCACCG
TCGATTGCCG GGGAAGGGGC CGTCAGGGCG GATAAGCAGA AACTCGCGCT GCTTGGCTCG
CTGCTGCTTT CGTTTATTGC CGGGGGGGTG GCGGGGGCCG TCGGGTTTAA ATATCTTGGA
TTTATAGCGA GTGTGCCGCT CGCTATTGTT CTGCTGACGC TAGCTGTTGT GCCTTTGGTC
GATGATGTGC GTGGTGTGCG CTGCTAG
|
|---|
| Protein sequence | MPINYLRGFT APERTDVTNR RLGRSLAFVA GAANAGGFLA VGQYTSHMSG IVSSLADNAV
LGEAGLFVSG LSSLFSFLVG AAASAILINW GRRRNLHSIY ATPLAIEAIL LLCFGLLGSN
LEHHRFLFVP ATVCVLCFVM GLQNAMITKI SRSEIRTTHV TGLVTDVGIE LGKMLYWNSP
SIAGEGAVRA DKQKLALLGS LLLSFIAGGV AGAVGFKYLG FIASVPLAIV LLTLAVVPLV
DDVRGVRC
|
|---|
| |