| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1128 |
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| Symbol | |
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| ID | 6282781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1269905 |
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| End bp | 1271596 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642620687 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001894768 |
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| Protein GI | 187923126 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.716574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGA CAACCTTGCG CCAGGCAACC GGGCCGGTCA GCTTCATGCT GATCGTCCTG
GTTTGCTGGT TCGTGGCCGG CATGGTTGCG GACCGGATGG TACAGCAAGA GCTGGACGCA
GCCCTGCGTG CGCAGCGGCA AATGTCCACC TCGATCGTGG ACAACATGGC GGAGGTGATC
GCCAGCGACC TTGCGATGTC TCGCGCCATC CCCGCCACCA TGGCCGAAAT GGACGTGGTC
CAGCGCGCTC TGGTGCAATC CCAGAATTAT GCCGTGAAGA GTGGAGTGAC GGAACCCGTC
CTGCGCGCCG CCTTGCTGAA AGACACGCAG ATGAGCGCCG TGAGCAATTT CCTGCACGAC
GCGCAAGGCT TCTCCGGGCT CGACCAGATC TGGCTCGTCA ACGCCAACGG TGTGTGCGTT
GCCTCGAGCA ATTCCATCAA CAATCCGCTC GCGGCCGAGC GCTCTTTCGT CGGCACCGAC
ATGCGCGTGC GCGGCTATCT GACGAACGCG CTGCTCGGTG CGTTCTCCGA AGCCTATGGC
GTTGGCCGCT CGAGCGGCGA GCCCGGCATC TTCATCGCCG CGCCGGCTTA CGCGGACGGT
CTGCTGGTCG GCGTGGTCGT CGCCAAGGTC GGCATCGCGC GGCTGCGCCA TTGGGTCGCG
CACGCCGGCA CCTTCGTCGC CGACGACAAC GGCGTCATCA TCATGGCGCA CAACAGCGAG
CTCGAAGGCC GCGCGCTGCC GAACTCGCGC GTCTCGCACA TGACACCCGC CGAGCGCAAG
GCCATCTATC TGCGCGACCA GATTCCCGAC ATCCATATCA GCGTGGACTC GCAGGTACGC
GAACAGGCGC CGTGGGTACC CTCCGCCGTG GCCGGGCAAC TGTTCGGCAT GTCCGAGCGG
CTCGTGCCGT CGCTCTATCA GACGCGCGGC GGCCTGAACT CGGGACTGTC CGCGCATCTG
GTCGATCCGC TCGTGGCCTG GCCGGAACTG CTGCGCAATC ACAAGCGCGA TCATTTGCTG
GTGTTTCTGA CGCTAGCCGG CACGGTCGCG CTGGCGTGGG TGATCACGGT CTCGTATGTG
CGCGAGCGGC GCCACCATCG CGCCACGCGC GACCTTGCCG AACAATTGCA ATCCGCCAAC
ACGCTACTGT CGGCCGAAGC GCGCCACGAC GCGCTGACCG GCGCGCTGTC GCGGCGCTAC
TTCCTCGACC TGCTGCGCCA TGAGATAGAA CGCGCGCACG CGGGCAACGA ACCGTTGTGC
ATGGCGATCG CCGACCTCGA CCACTTCAAG CAGATCAACG ACCGCTTCGG CCACGCCGCC
GGCGACCGCG CGCTCGAACA TTTCGTCGAT ACCTGCCGCG CCGAACTGCG CGGCGCCGAC
GCGATCGGCC GCCTGGGCGG CGAAGAGTTC GGCCTGCTGC TGCCGGCCAC GGATCTCGCC
GGCGGCCACG AAGTCGTCGA ACGCTTGCGG CTGCGCCTGA AGGCCATGCC TTCGCCGAAG
TTGCCGGCAT CGGTGGGCTT GAGCGTGAGC ATCGGCATTA CCGAACTCTC GCCCGACGAT
CTGCCCGAGC GGATCATGAG CCGCGCCGAC ATGGCGTTGT ACGCGGCGAA ATCGGGCGGC
CGCGACCGCA CCGAGGCCTT GCCGCCCGAC GACACCGCAC CGCCTGCCCG CACGGTGGCC
AACGTCTGGT AA
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| Protein sequence | MNRTTLRQAT GPVSFMLIVL VCWFVAGMVA DRMVQQELDA ALRAQRQMST SIVDNMAEVI
ASDLAMSRAI PATMAEMDVV QRALVQSQNY AVKSGVTEPV LRAALLKDTQ MSAVSNFLHD
AQGFSGLDQI WLVNANGVCV ASSNSINNPL AAERSFVGTD MRVRGYLTNA LLGAFSEAYG
VGRSSGEPGI FIAAPAYADG LLVGVVVAKV GIARLRHWVA HAGTFVADDN GVIIMAHNSE
LEGRALPNSR VSHMTPAERK AIYLRDQIPD IHISVDSQVR EQAPWVPSAV AGQLFGMSER
LVPSLYQTRG GLNSGLSAHL VDPLVAWPEL LRNHKRDHLL VFLTLAGTVA LAWVITVSYV
RERRHHRATR DLAEQLQSAN TLLSAEARHD ALTGALSRRY FLDLLRHEIE RAHAGNEPLC
MAIADLDHFK QINDRFGHAA GDRALEHFVD TCRAELRGAD AIGRLGGEEF GLLLPATDLA
GGHEVVERLR LRLKAMPSPK LPASVGLSVS IGITELSPDD LPERIMSRAD MALYAAKSGG
RDRTEALPPD DTAPPARTVA NVW
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