| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1119 |
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| Symbol | |
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| ID | 6282632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1260981 |
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| End bp | 1262132 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620678 |
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| Product | outer membrane porin, OmpC family |
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| Protein accession | YP_001894759 |
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| Protein GI | 187923117 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.561071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAG CTTTGCTCGC CGCTGCGCTG ATGACAGCCG GTGTTGTTGC GCACGCCCAA
AGCAGCGTGA CGCTGTACGG CCGCCTTGAC GCCGGTATCG AATACATGAC GGGCGTTCCG
CAAGGCTCGA ACGCAGCTGG CTCGGCAACG GGCAGCACGA ACCGTTGGCG CGCGGAAAGC
GGCGACTGGG GTACCAGCCT GTGGGGCTTG AAGGGCGTTG AGGACATCGG TGGCGGCAAC
AAGGTCCTGT TCCAGTTGGA AGGCTCCTTC AACACCATGA CGGGTGCAGG CCCTGGCGGC
GGCGGTCTCT TCAATCGTTG GGCAACTGTC GGCCTGTCGA ACGACGCATA CGGTACGTTC
ACGATGGGCC GCATGCTCTA CATCTCGAAC GGCGTGTGGG ACTTCGACCC GTTCGGTCAA
TCGAACTGGT CGTCGGCATC GCTGGTGCGT GGCCGCAACT GGCCGCAATC GAGCAACAAC
TTCGCGTACC AGTCGCCGAA GATCGCAGGC TTTGACTTCT ACGGTCAATA CGCGCTGTCG
AACGCAACGA GCTGGAACGG CAACGGCACG ACCGCTCAAG GTCGCGAAGC TGGCGCACAG
GTCACCTACA CGAACTCACT GTTCCAGGTT CGCGGTCTGT ACGACGAAAT CCGCAACCCG
GCTAACGGCG TGCTGTACGG TCCGTCGGCA AGCACGGTCA ACCCGGGCAA CATCGGCAGC
GGCGTATTCG CGGCATCGCG TGAATACTCG GCTCTGTTGA ACGTGTTCCT CGGCCAGTTC
AAGATTCAGG CTGCTTACCA GGCTGTCCGT TCGGCAGGTG CACAGAACGT TCTGCCGGGC
CAGCCGACGA CTCTGGATCA CGAATGGGGC GGTGTGACGT GGCAAGCAAC GCCGGCAGCG
GCGCTGATTG CAGCGGTCTA CCACGTGAAC GGCAACAATG GCGCAGGCAA CGCGACGATC
TACACGGTCG GCGGCTCGTA CAACCTGTCC AAGCGCACGC TGCTGGACAT TCAGGTCGCA
ACGACGCAAA ACAGCAAGAC GGCTAACTAC GGCCTGAATG CAAACAACGC AGGCACGTCG
ACCAGCACGG ACAACCCGCT GCCGGGTCAC AGCCAAACTG GCGTGTACGC AGGTATTCAA
CACTCGTTCT AA
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| Protein sequence | MKKALLAAAL MTAGVVAHAQ SSVTLYGRLD AGIEYMTGVP QGSNAAGSAT GSTNRWRAES
GDWGTSLWGL KGVEDIGGGN KVLFQLEGSF NTMTGAGPGG GGLFNRWATV GLSNDAYGTF
TMGRMLYISN GVWDFDPFGQ SNWSSASLVR GRNWPQSSNN FAYQSPKIAG FDFYGQYALS
NATSWNGNGT TAQGREAGAQ VTYTNSLFQV RGLYDEIRNP ANGVLYGPSA STVNPGNIGS
GVFAASREYS ALLNVFLGQF KIQAAYQAVR SAGAQNVLPG QPTTLDHEWG GVTWQATPAA
ALIAAVYHVN GNNGAGNATI YTVGGSYNLS KRTLLDIQVA TTQNSKTANY GLNANNAGTS
TSTDNPLPGH SQTGVYAGIQ HSF
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