Gene Bphyt_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1000 
Symbol 
ID6282273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1122320 
End bp1122910 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content64% 
IMG OID642620561 
Productalpha-ribazole phosphatase 
Protein accessionYP_001894643 
Protein GI187923001 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID[TIGR03162] alpha-ribazole phosphatase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCG TCCTGATTCG TCATCCCGCG GTCGCGCTCG ACGCGGGCGT GTGTTACGGC 
CACAGCGACG TGGCGCTAGC CGAAGATGCC GAGGTGTCGT CGACGACCCT TGCCCTGAAG
CTCGCGACCT TGCAGGTGCC CGCGCCACGC GTGCTGATGT CGAGTCCGTT GAAGCGCTGC
TCGGCGCTCG CCGCCGAGTT GGCGAACGAC TTCGGCAGCG TCGTCAGTCA CGACGACCGG
CTGATGGAAA TGAACTTTGG CAATTGGGAA GCGCAGCGCT GGGACGCGAT CGATCGCGAA
TTGCTAGACG ACTGGGCAGC CAACTTCGAA CATGCGCGCG CGCATGGCGG CGAAAGCGTC
GCGCAGTTCG TCGCGCGGGT GCGTGCATGG CTCGATGCAT TCGCGCTCAC GCGCGAGTTG
TCGCCGGCTT ATGTGGTCAC ACATGCGGGC GTGATGCGGG CGATCGCGTC GATCGTGCTG
GACGTGCCGC TGGAGCGCTG TTTGCGATGG TCGCTCGATA CGACCGGGAT CGTCTGGTTG
CGCAGAAACG ATGAAACGCA GCAGTGGGTG TTGGTGCGGT GGAATGCGTG A
 
Protein sequence
MDIVLIRHPA VALDAGVCYG HSDVALAEDA EVSSTTLALK LATLQVPAPR VLMSSPLKRC 
SALAAELAND FGSVVSHDDR LMEMNFGNWE AQRWDAIDRE LLDDWAANFE HARAHGGESV
AQFVARVRAW LDAFALTREL SPAYVVTHAG VMRAIASIVL DVPLERCLRW SLDTTGIVWL
RRNDETQQWV LVRWNA