Gene Bphyt_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0618 
Symbol 
ID6283969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp671787 
End bp672599 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content67% 
IMG OID642620183 
ProductCitrate (pro-3S)-lyase 
Protein accessionYP_001894267 
Protein GI187922625 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0840536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC GCAGCTATCT TTTCGTGCCG GGCGATCGCC CCGAGCGCTT CACCAAGGCG 
CTCGACACAA ACGCGGACGC AGTGGTGATC GATCTCGAAG ACGCGGTCGC GCCCGCGGCG
AAACAAGCTG CGCGCGAGGG CCTGCAACGC TGGCTATCGG CGGCGGACGT TAGGCGGCTG
ATCGTCCGCG TGAATGCGGT GGGCACGCCG TGGCATCTCG ATGACGTGGA CATGGTGAGC
GCGTCCGGCC TTTCCACGAT GATGCTGCCG AAGTCGGACA GCGCATGGCA ACTCGCCGAG
GTCGCCGCGC GGCTGCCATC GCAGATGCGA ATCGTGGCGC TGATCGAAAC CGTGGCGGGC
GTAGTGGCGA TGCGGGAGAT TGCCGGTGCG CCGTCGGTCA TGCGGCTCGC TTTCGGCACG
GTGGATTTTT GCGGCGACGC CGGGATCGAA GGGCTCGGCG TCGAACTGGA TTATGTGCGC
TCGCAGATGG TGATCGAATC GCGCTATGCG GGTCTGCCCG CGCCGATCGA CGGTGTGACA
CTGGAACTCG ACGATCTCGC GCGTCTGACG GAGCATGTCG CCACCGCAAG GCGCTTCGGC
TTCGGCGGCA AGCTGTGCAT TCACCCACGA CAGGTGGACC CGGTCAACGG CGGCTTTGCA
CCTAGCGAGA ACGAGCGACG CTGGGCGTCG CGCGTTCTGG CGGCTTGCCG CGAGCACCCG
GAAGGCGCGT TCGCGGTGGA CGGCAAACTG GTCGACCGGC CGGTGATCGA ACGGGCGCGG
CGGATTGCGG AGTTCGATGC GCTCCTGCCC TGA
 
Protein sequence
MDARSYLFVP GDRPERFTKA LDTNADAVVI DLEDAVAPAA KQAAREGLQR WLSAADVRRL 
IVRVNAVGTP WHLDDVDMVS ASGLSTMMLP KSDSAWQLAE VAARLPSQMR IVALIETVAG
VVAMREIAGA PSVMRLAFGT VDFCGDAGIE GLGVELDYVR SQMVIESRYA GLPAPIDGVT
LELDDLARLT EHVATARRFG FGGKLCIHPR QVDPVNGGFA PSENERRWAS RVLAACREHP
EGAFAVDGKL VDRPVIERAR RIAEFDALLP