| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0420 |
|---|
| Symbol | |
|---|
| ID | 6283509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 465161 |
|---|
| End bp | 466120 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642619984 |
|---|
| Product | K channel inward rectifier conserved region 2 domain protein |
|---|
| Protein accession | YP_001894069 |
|---|
| Protein GI | 187922427 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.437636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTG AATCATCAGA CCGTCCTTCC GGCTTCGGCG ACGCCGAAGC ACGCGCATCG
GCGCGCCGAC CGGTAGGCAG CCGCGAATTC CGTCTGGACG AGCGCGTGGT CATCGAGCAT
GGCACGCCGA CGCCGCTCTG GCAGGACCTC TATCACCGCG CCCTCATGGT TCGCTGGCCG
GTTTTTTTCG TATCGCTCGC GGTCTTGTTC CTGCTGCTCA ACACCACGTT TGCCGCGCTC
TACATGTTGG GCGACGCGCC GATCGCCAAT CAGTTTCCAG CCGGTTTTGG CGGCGCGTTT
TTCTTCAGCG TCGAGACGCT CGCCACGGTC GGATATGGCG ACATGCATCC GCAAACCGTC
TACGCGCACT GGATCGCCAC GCTGGAAATT TTCGTCGGCA TGTCCAGCAT CGCGTTGGCG
ACCGGACTCA TTTTCGCGCG CTTCTCTCGT CCGCACGCCA AGATCATCTT TGCCCGTTAC
GCGGTGATCA GGCCGCTCGA CGGCCGCATG ACACTCATGG TGCGCTCGGC CAACGCACGC
CGCAACGTGA TCGCCGAGGC CCGCGCACGA CTGCGCATAC TGCGTACGGA GACCACGCTC
GAAGGCTTCA CGTTGCGCAA ACTCTATGAC CTGACGCTGG TTCGCGATCA ACATCCGGTG
TTCAAGCTGG GCTGGACGGT CATGCATATC GTCGACGAAA CCAGCCCGCT GTTTGGCGAA
ACCGCCGAAA CGCTCAGGAA CCGCGACGTG TTGCTGCTGC TCACCCTTGA AGGCGTCGAC
GAGTCGACCT CGCAAACCAT GCAGGCGCGC CACACGTGGT CGTGCGATCA GATTTACTGG
CAGCACCGTT TCGTCGACAT CATGACCGAG AAAGACGGCG TGAGCCATAT CGACTACGCG
CATTTCAACG AGATCGCGCC TCTCGACGAG GCGCCCGTCG CAACGCACAG TCGTCCATAA
|
|---|
| Protein sequence | MATESSDRPS GFGDAEARAS ARRPVGSREF RLDERVVIEH GTPTPLWQDL YHRALMVRWP
VFFVSLAVLF LLLNTTFAAL YMLGDAPIAN QFPAGFGGAF FFSVETLATV GYGDMHPQTV
YAHWIATLEI FVGMSSIALA TGLIFARFSR PHAKIIFARY AVIRPLDGRM TLMVRSANAR
RNVIAEARAR LRILRTETTL EGFTLRKLYD LTLVRDQHPV FKLGWTVMHI VDETSPLFGE
TAETLRNRDV LLLLTLEGVD ESTSQTMQAR HTWSCDQIYW QHRFVDIMTE KDGVSHIDYA
HFNEIAPLDE APVATHSRP
|
|---|
| |