| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0395 |
|---|
| Symbol | |
|---|
| ID | 6282315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 431437 |
|---|
| End bp | 432873 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642619958 |
|---|
| Product | putative hemagglutinin-related transmembrane protein |
|---|
| Protein accession | YP_001894044 |
|---|
| Protein GI | 187922402 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3889] Predicted solute binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCA AATTCAAACT GACGGCGATC GCCATGTGCG TCACGTCGAT GATCGTCCTG
ACGGGATGCG GAAGCACCCT GAACAGGCCA GGCGTGGGGA GCGGAGCGGG CGGCGGCACG
CCGACTCCCA CACCGACGCC TACGCCCACA CCTACGCCGA CGCCGACTCC CACACCAACG
CCGACACCGA CACCCACGCC CACTCCGACG CCCACCAGCG CCAACCCCGT CGGCGTCGTC
GTGCAAAACA GCGGCAACGT CGTCAGCGCC GTCGGCCAAA CCGTCTCCGC CGTGGGCAGC
CAGATCGGCC TCACGCCGAT TCCCGGCGCG AATCCGGCGA CCACCACGGC GCTCGGCAAT
GTCGTGTCGA ATCTCGGCAG CGGCGTGACC GCGGTCGGCA CAGGCGTGGC GAACGGCCTG
GGCCAGTTGG GCAATTCCAC CGATCCACTC GGCACGACGC TCGCCAGCAG CGGCAACCTG
GTCTACAACG CCGGCCAGTC CGTCAACAGC GCCGGCCAAC TCGTGACGAG TCTCGGCAGC
GGACCTACCG CGCCGCTCAG TCCGTTGACG ACACCGCTGG GCAGCGCGGT CTCGACGGTG
GGCAACGCCG TCAGCGGCCT GGGTACGCAA CTCGGCTCGC AGTTGACCAA CGGCCCGATC
CAGCAAGTCA CGCAGACCGT CAGCACCGCG ATCACGCCGA TCACGAGCAC GCTCGCGCAG
ACGACGCAAA CCGTCGGCGA CACGACCGGT CTCGGCGCGC CCCTGAACGG CCTGCTCTCG
ACGGTCGGCC ATGGCCTCGA TAGCGCCGGC GGCAAACTCA GCGGCGCGAC CGGCAATCCG
ATCGGTGAGA ATCTCGGCAA CGTCGTCACC AAGCTCGGCG ATACGGTCAC GTCCGCAGGC
GGCCTGCTGA CGGCGGGCGG CGCCGGTAGC GGCAATCCGC TCGGCGGCAT CACAGGCATT
CTGAATCCGG GCAGCGGCGG CACGGGCTCG CCGCTCGCGC CGTTGACCAG CATTCTCACC
GCGCTGCCCG GCACCTTGAG CGGCGGCCTG ACGGGCGGCA CCGGCGCCGG TGGCCCACTC
GCGCCGTTGA CCAATGTGGT CACCACCTTG ACCGGCGGTC TCGGCGGAGC GGGTTCGGGC
AGTCCGCTTG CGCCGCTCAC CGGCGTCGTG AGCTCGGTCA CGGGCGCATT GAGCGGCGCG
ACGGGCAGCG GCGGCAATCC GCTCGCGCCG GTGACCTCGG TCGTGTCGAC GCTGACCGGC
GCGCTGGGCT CGGCCACGGG ATCGGGTAAC GGCGGCGGAA CCAGCAACCC GCTCGCGCCG
ATCACCGGCC TGTTGAGCAC CGTCACCGGC ACCTTGAGCG GCGCGGCAAC GTCCGCCGGC
GGCACGACCG GCGGCGGCTT GCTCGGCGGT CTCGGCAGCA TCGCTTCAAA GAAGTGA
|
|---|
| Protein sequence | MNRKFKLTAI AMCVTSMIVL TGCGSTLNRP GVGSGAGGGT PTPTPTPTPT PTPTPTPTPT
PTPTPTPTPT PTSANPVGVV VQNSGNVVSA VGQTVSAVGS QIGLTPIPGA NPATTTALGN
VVSNLGSGVT AVGTGVANGL GQLGNSTDPL GTTLASSGNL VYNAGQSVNS AGQLVTSLGS
GPTAPLSPLT TPLGSAVSTV GNAVSGLGTQ LGSQLTNGPI QQVTQTVSTA ITPITSTLAQ
TTQTVGDTTG LGAPLNGLLS TVGHGLDSAG GKLSGATGNP IGENLGNVVT KLGDTVTSAG
GLLTAGGAGS GNPLGGITGI LNPGSGGTGS PLAPLTSILT ALPGTLSGGL TGGTGAGGPL
APLTNVVTTL TGGLGGAGSG SPLAPLTGVV SSVTGALSGA TGSGGNPLAP VTSVVSTLTG
ALGSATGSGN GGGTSNPLAP ITGLLSTVTG TLSGAATSAG GTTGGGLLGG LGSIASKK
|
|---|
| |