| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0161 |
|---|
| Symbol | |
|---|
| ID | 6283760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 175142 |
|---|
| End bp | 175465 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642619735 |
|---|
| Product | Conjugal transfer protein TrbC |
|---|
| Protein accession | YP_001893824 |
|---|
| Protein GI | 187922182 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.862571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATGGC GTTGGCTTCC GGAGCGGCTG GAAAAACCCG GGACGGCGCG CCCCTCCCGA
CGCGGGCTTG CACTTCTTCC AGTGCTGGCC CTGACGGTGA CGCCTGCCTG GGCCCAGCTT
TCGCAGGTCA ACACCCTGCT CACGACGATC CAGACGACAT TGCTTAGCGT GGGCGCGGTG
GTGTGCTCGA TATCGATCAT CTGGGCGGGT TTCAAGATGA TGTTCCAGCA TGCGCGCTTT
GGCGACATCG CCAACGTATT CATCGGCGGC CTGTTCGTGG GCTGCGCCAC GGTGATCGCG
GCGATGCTGA TCCCGACGAG CTGA
|
|---|
| Protein sequence | MIWRWLPERL EKPGTARPSR RGLALLPVLA LTVTPAWAQL SQVNTLLTTI QTTLLSVGAV
VCSISIIWAG FKMMFQHARF GDIANVFIGG LFVGCATVIA AMLIPTS
|
|---|
| |