Gene Bphyt_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0148 
Symbol 
ID6281894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp164854 
End bp165588 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID642619722 
ProductABC transporter related 
Protein accessionYP_001893811 
Protein GI187922169 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.704024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCC AGTTTCTTCT GGGCACCGGC CTTTCGCGCG CGTTTGGCGG GATCAGGGCG 
GTGGCCGGCG TCGACGTCAG CATCGCGCCA CGCGACCTGC TGTGTGTGAT TGGTCCGAAC
GGGGCCGGCA AGAGTTCGCT CGTCGGCCTG CTGTCGGGCG CGATTACCCC CGGATCCGGT
GAACTGTATC TCGATGGTGA GCGGATGACA GGCCGCCCGA TGCACGCGTT CTGCCGGCGC
GGTGTGGTGC GCAAGTTCCA GGGGACCAAC ACCTTCCTCA CGATGACCGT GCGCGACAAC
CTGATGGTGG CAGGCCTGGG CGTCGCGGCT TACCGGGCCT CGCCCATGCC GGATCCCGAC
GCCGTCCTGG AAGAAGTGGG TCTGTCCGGG CAGGCGTGCG AACTCGCGTC GCATCTGCCG
CATGGGGAGC GGCAGTGGCT CGAAATCGGC ATGGCGATCA TGTGTCAGCC CGCACTGCTG
CTGCTCGACG AGCCTGCGGC GGGCCTCTCT GCAAAGGACG CGCAGCGGCT GGTGCGCCTC
ATCCACCGGC TGCGGGAGCG GTGCGCGGTA CTCGCCATCG AGCACGATCT GGACTTCGTG
CAGTCTCTCG CGTGCGAGAC ATGGGTGATG CATCGGGGCG AAGTGGTTCG ACGCGGATCG
TATGCGGAGA TCGCAGCCGA CGAGGAGATC CGCCGCATCT ATCTGGGACG GGGAGCGACA
CATGCTGCAC ATTGA
 
Protein sequence
MDSQFLLGTG LSRAFGGIRA VAGVDVSIAP RDLLCVIGPN GAGKSSLVGL LSGAITPGSG 
ELYLDGERMT GRPMHAFCRR GVVRKFQGTN TFLTMTVRDN LMVAGLGVAA YRASPMPDPD
AVLEEVGLSG QACELASHLP HGERQWLEIG MAIMCQPALL LLDEPAAGLS AKDAQRLVRL
IHRLRERCAV LAIEHDLDFV QSLACETWVM HRGEVVRRGS YAEIAADEEI RRIYLGRGAT
HAAH