Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0148 |
Symbol | |
ID | 6281894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 164854 |
End bp | 165588 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619722 |
Product | ABC transporter related |
Protein accession | YP_001893811 |
Protein GI | 187922169 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.704024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAGCC AGTTTCTTCT GGGCACCGGC CTTTCGCGCG CGTTTGGCGG GATCAGGGCG GTGGCCGGCG TCGACGTCAG CATCGCGCCA CGCGACCTGC TGTGTGTGAT TGGTCCGAAC GGGGCCGGCA AGAGTTCGCT CGTCGGCCTG CTGTCGGGCG CGATTACCCC CGGATCCGGT GAACTGTATC TCGATGGTGA GCGGATGACA GGCCGCCCGA TGCACGCGTT CTGCCGGCGC GGTGTGGTGC GCAAGTTCCA GGGGACCAAC ACCTTCCTCA CGATGACCGT GCGCGACAAC CTGATGGTGG CAGGCCTGGG CGTCGCGGCT TACCGGGCCT CGCCCATGCC GGATCCCGAC GCCGTCCTGG AAGAAGTGGG TCTGTCCGGG CAGGCGTGCG AACTCGCGTC GCATCTGCCG CATGGGGAGC GGCAGTGGCT CGAAATCGGC ATGGCGATCA TGTGTCAGCC CGCACTGCTG CTGCTCGACG AGCCTGCGGC GGGCCTCTCT GCAAAGGACG CGCAGCGGCT GGTGCGCCTC ATCCACCGGC TGCGGGAGCG GTGCGCGGTA CTCGCCATCG AGCACGATCT GGACTTCGTG CAGTCTCTCG CGTGCGAGAC ATGGGTGATG CATCGGGGCG AAGTGGTTCG ACGCGGATCG TATGCGGAGA TCGCAGCCGA CGAGGAGATC CGCCGCATCT ATCTGGGACG GGGAGCGACA CATGCTGCAC ATTGA
|
Protein sequence | MDSQFLLGTG LSRAFGGIRA VAGVDVSIAP RDLLCVIGPN GAGKSSLVGL LSGAITPGSG ELYLDGERMT GRPMHAFCRR GVVRKFQGTN TFLTMTVRDN LMVAGLGVAA YRASPMPDPD AVLEEVGLSG QACELASHLP HGERQWLEIG MAIMCQPALL LLDEPAAGLS AKDAQRLVRL IHRLRERCAV LAIEHDLDFV QSLACETWVM HRGEVVRRGS YAEIAADEEI RRIYLGRGAT HAAH
|
| |