Gene Bphyt_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0004 
Symbol 
ID6283582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp5901 
End bp6305 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content57% 
IMG OID642619592 
ProductPAAR repeat-containing protein 
Protein accessionYP_001893681 
Protein GI187922039 
COG category[S] Function unknown 
COG ID[COG4104] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0248137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAAGCT TACGGGTCTT TTTTATAGTT CGGACTGTCC GCGTCCCGCG GTATCTCATA 
GACGCCTTTG TTGAAGATTT TTCACCGATC CATTTTCGTC CGCACCGGCG ATCACGCACT
AAAGCAGCCA TCGAGTTTCA TTCCGCCGAC ATCATATTAA AGTATTCTCC CGCTTCCCAT
AGCCACGGCG GGCATGTGAC GTCGGGCGCG TCGAACTCGA AAACTGGCGG GCAACCCATC
GCCCGTCTGG GTGACGCCGC AATGTGCGAG ATCCACGGCA TTACTTCGAT TTCCAAGGTT
TCGGGCAAGG TCATGCTCGA CGGCAAGGAG GCCGCGTGTG ATGGCGACGA ACTCGCCTGC
GGCGGTCGAT TGATAGCGAG TCAGGTCGAC ACGGGTAGCC GCTGA
 
Protein sequence
MRSLRVFFIV RTVRVPRYLI DAFVEDFSPI HFRPHRRSRT KAAIEFHSAD IILKYSPASH 
SHGGHVTSGA SNSKTGGQPI ARLGDAAMCE IHGITSISKV SGKVMLDGKE AACDGDELAC
GGRLIASQVD TGSR