Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0004 |
Symbol | |
ID | 6283582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 5901 |
End bp | 6305 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642619592 |
Product | PAAR repeat-containing protein |
Protein accession | YP_001893681 |
Protein GI | 187922039 |
COG category | [S] Function unknown |
COG ID | [COG4104] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0248137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGAAGCT TACGGGTCTT TTTTATAGTT CGGACTGTCC GCGTCCCGCG GTATCTCATA GACGCCTTTG TTGAAGATTT TTCACCGATC CATTTTCGTC CGCACCGGCG ATCACGCACT AAAGCAGCCA TCGAGTTTCA TTCCGCCGAC ATCATATTAA AGTATTCTCC CGCTTCCCAT AGCCACGGCG GGCATGTGAC GTCGGGCGCG TCGAACTCGA AAACTGGCGG GCAACCCATC GCCCGTCTGG GTGACGCCGC AATGTGCGAG ATCCACGGCA TTACTTCGAT TTCCAAGGTT TCGGGCAAGG TCATGCTCGA CGGCAAGGAG GCCGCGTGTG ATGGCGACGA ACTCGCCTGC GGCGGTCGAT TGATAGCGAG TCAGGTCGAC ACGGGTAGCC GCTGA
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Protein sequence | MRSLRVFFIV RTVRVPRYLI DAFVEDFSPI HFRPHRRSRT KAAIEFHSAD IILKYSPASH SHGGHVTSGA SNSKTGGQPI ARLGDAAMCE IHGITSISKV SGKVMLDGKE AACDGDELAC GGRLIASQVD TGSR
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