Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0001 |
Symbol | dnaA |
ID | 6282732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 299 |
End bp | 1936 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642619589 |
Product | chromosomal replication initiation protein |
Protein accession | YP_001893678 |
Protein GI | 187922036 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATT TCTGGCAACA CTGTTCCGCA TTGCTGGAGC GCGAGCTGAC GCCCCAGCAG TACGTGACGT GGATCAAACC GTTGGCCCCG GTCGCCTTCG ACGCCGCTGC GAACACGCTC AGCATCGCCG CGCCGAACCG CTTCAAGCTC GACTGGGTCA AGAGCCAGTT CTCCGGCCGC ATCGCGGATA TGGCCCGCGA TTTCTGGCAG GCTCCCGTCG ACGTCCAATT CGTGCTCGAC CCGAAAGCCG GCATGCGTGC CCCTGCCGCA GCCGCGCCGG CCCCGGCTTC TGCGCGTCCG GCTTCCGCGC CTGGCTCGAT GGGCGGCAGC GCCGGCAATG GTGCCGCGGT GGACGCAGCC GTCGGCGCCG TGCAAGCGGC GCAGGCCGCG CGCGCCGCTG GTACGAACGG CGCGAACAAC GCGATGGCCA ATCTCAACGC CAATGCCCGC GCCGCAGCTG AACAAAATGC GAACGCGCGC GCCGCGGCCG CTGACGATTC CGCCGACCTC GATCTGCCAA GCCTCGACGC GAACGAAGCG GCAGCCGCCC GCCGCACGTG GCGACCGGGC CAAAGCGCCA GCTCGAACGG CAACGGCGAG ACCGACTCGA TGTACGAGCG CTCCAAGCTG AACCCGGTTC TGACCTTCGA CAACTTCGTG ACCGGTAAGG CCAACCAGTT GGCACGCGCC GCGGCGATTC AGGTCGCGGA CAACCCCGGT ATCTCGTACA ACCCGCTGTT TCTGTATGGC GGCGTGGGCC TCGGCAAGAC CCACCTGATC CACGCGATCG GCAACCAGCT TCTAATGGAT AAGGCCGGCG CGCGGATTCG CTACATCCAC GCGGAGCAGT ACGTGTCCGA CGTGGTGAAG GCCTACCAGC GCAAGGCGTT CGACGATTTC AAGCGCTACT ATCACTCGCT CGACCTGCTG CTGATCGACG ATATTCAATT CTTTTCAGGC AAGTCGCGCA CACAAGAAGA ATTCTTCTAC GCGTTCGAAG CGCTGGTCGC GAACAAGGCG CAGGTGATCA TTACCAGCGA CACGTATCCG AAGGAAATTT CGGGTATCGA CGACCGGTTG ATCTCGCGCT TCGACTCCGG CCTGACCGTG GCGATCGAGC CGCCCGAGCT GGAAATGCGC GTCGCGATTC TGATGCGCAA GGCGCAATCC GAGTTCGTGA GCCTGAATGA AGACGTCGCG TTCTTCGTCG CGAAACACTT GCGTTCGAAC GTGCGTGAAC TCGAAGGCGC ACTGCGCAAG ATCCTCGCGT ACTCGAAGTT CCACGGCCGC GAAATCACGA TCGAAGTCAC CAAAGAAGCG CTGAAAGACC TGCTGACGGT GCAGAACCGG CAGATTTCGG TGGAAAACAT CCAGAAGACC ACGGCTGACT TTTACAGCAT CAAGGTCGCG GACATGTATT CGAAGAAGCG CCCCGCGAAC ATCGCGCGGC CGCGGCAGAT CGCCATGTAT CTGGCGAAAG AGCTGACCCA GAAGAGCTTG CCGGAAATCG GCGAACTGTT CGGCGGACGC GACCACACCA CCGTGCTGCA CGCGGTGCGC AAAATTGCCG ACGAGCGCAG CAAGGACGCG CAACTGAACC ACGAACTGCA CGTGCTGGAG CAGACGCTGA AGGGCTGA
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Protein sequence | MNDFWQHCSA LLERELTPQQ YVTWIKPLAP VAFDAAANTL SIAAPNRFKL DWVKSQFSGR IADMARDFWQ APVDVQFVLD PKAGMRAPAA AAPAPASARP ASAPGSMGGS AGNGAAVDAA VGAVQAAQAA RAAGTNGANN AMANLNANAR AAAEQNANAR AAAADDSADL DLPSLDANEA AAARRTWRPG QSASSNGNGE TDSMYERSKL NPVLTFDNFV TGKANQLARA AAIQVADNPG ISYNPLFLYG GVGLGKTHLI HAIGNQLLMD KAGARIRYIH AEQYVSDVVK AYQRKAFDDF KRYYHSLDLL LIDDIQFFSG KSRTQEEFFY AFEALVANKA QVIITSDTYP KEISGIDDRL ISRFDSGLTV AIEPPELEMR VAILMRKAQS EFVSLNEDVA FFVAKHLRSN VRELEGALRK ILAYSKFHGR EITIEVTKEA LKDLLTVQNR QISVENIQKT TADFYSIKVA DMYSKKRPAN IARPRQIAMY LAKELTQKSL PEIGELFGGR DHTTVLHAVR KIADERSKDA QLNHELHVLE QTLKG
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