Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4920 |
Symbol | |
ID | 6285828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 1273189 |
End bp | 1273986 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619396 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001893431 |
Protein GI | 187927086 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.94136 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTACACCG CCTATCGCGA GGCCGATCTG CGCGTGCCCA CGGGCGCACC GTTCTACTTT CGCTACGATC ACTTCCAGCC CGAGACCGAC ATCGAGCCGC ACACCCACCC GTGGGGACAG CTCAACCGCA TCGCGCTCGG GCTGATGGAG GTGGTGGTCG AGACGCGCCG GCTGACGGCG CCGGCCGAAT ACCTGATCTG GGTCCCGGCC AACCAGCCGC ATTCTGCATC GATCCGGCAG GCGACGGACT TCCTCTCGGT CTATGTCGCG GAGCCGCTTG CGCGCCGGCT GCCGCCAATG GCCTGCCTGA TCCAGCAGAC ACCGCTGGTC CGCGCCCTGT TAGAGGACTT CCAGGCACGC CGCATCAGCG TCATGGCCGA CGATTGGGAT CTGCGCCAGT TCGAGCTGCT GGTCGAGATG CTGGGCCGCG CCGGCCATAC CGACAGCTAC CTGCCCGACA GCAAGGACCG TCAACTAGAA CCCATCCTGC AGGCGATCCG CCTGTTCCCC GCCGACAATA CTCCGCTCAA AACCTGGGCG GAGCGCGTCC ACAGCACCGA ACGCACGCTC GCACGGCGGT TCCAGCACGA GCTTGGCATG AGCTTCGTAC AGTGGCGCAA TCGCGTTCGC CTGCTGCGCG CACTGGTGTG GCTGAAAGAG GATTGCTCGA TCCAGGACAT CGCACTGGCC CTCGGCTACG GCACGCCATC GGCGTTCATC GCCATGTTCC GCAAGCAGAT CGGCTTCTCG CCGCAGCGGT ATCGCCGACA GATGTGCGGC GAGGTGGCGC GCGCCTAA
|
Protein sequence | MYTAYREADL RVPTGAPFYF RYDHFQPETD IEPHTHPWGQ LNRIALGLME VVVETRRLTA PAEYLIWVPA NQPHSASIRQ ATDFLSVYVA EPLARRLPPM ACLIQQTPLV RALLEDFQAR RISVMADDWD LRQFELLVEM LGRAGHTDSY LPDSKDRQLE PILQAIRLFP ADNTPLKTWA ERVHSTERTL ARRFQHELGM SFVQWRNRVR LLRALVWLKE DCSIQDIALA LGYGTPSAFI AMFRKQIGFS PQRYRRQMCG EVARA
|
| |