Gene Rpic_4825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4825 
Symbol 
ID6285562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1164536 
End bp1165795 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content70% 
IMG OID642619301 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001893336 
Protein GI187926991 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.700339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG CGGTACTTTC CTCATCGGCC GCTGGGCAGT TCTCGCGCCA TCACCGTTGG 
AAGGTCCTCG GCGTGGGCGT TGCGGCCAAC GCCAGTTTTT CAGCGGCATT CTCGGGTATT
CCCACGACGG CGGTGTTCAT CCGCTCCGCC TATCACCTGG GCAATGCGGA GCTTGGCATC
GCCCTCGGGC TGCTCGGGCT CGGGATTGCC ATCAGCGAGT TGCCGTGGGG CCTGCTGACC
GACCGTTGGG GCGATCGCAC CGTGCTCCTG GCGGGCCTCG GCCTGACGGC GCTGGCGCTG
CTGCTGATGG CCGGCTTTGC GGCGCCTGCG CATGGCAACG TGCCGCCGCT GACGTGGCTG
GCTGCGGGCA TGCTGAGCGT CGGCTTGCTG GGCGGCAGCG TGAATGGCTC CAGTGGCCGC
GCCGTGATGG GCTGGTTTCG CGAAGGCGAG CGTGGGCTGG CCATGAGCAT CCGCCAGACC
GCCGTGCCGC TGGGCGGTGG CATTGGCGCG CTCGTGCTGC CGAGCCTGGC GGCACACGCG
GGATTTGCCG CGGTGTATGG CGTGCTCGCA GCCGCCTGCG CGCTCACAGC AGTGCTGACG
TGGCTGTGGG TGCACGAAGC CGCGCCGGCA GCAGACGCTG GCGTTGCTCG CGTGGTTTCC
GAGGGGCCCG GCCCGTTGCG CGACGTGATG CTCTGGCGGA TGGCGCTGGC GATCGGGCTG
CTGTGCGTGC CACAGGGCGC GGTGGTGGCA TTTGCCACCG TCTTCCTGCG CGACTTCGCA
CATGCCGATG TGCTCACCCT GAGCTTGACC ATGGCGGCGG TGCAGGGCGG TGCGGCGGTG
ATGCGCGTGT GGAGCGGCCG GTGGACGGAT CGCCACGGCA ACCGACGTGC CTATCTGCTG
GCCTGCGCAC GCTTGAGCGC AGCCCTGTTC GTCGTGCTGG CTGGCGTGGC ATGGCTCACC
GGCACGCTGC ACGCCGACCT GGCAGTCATG CGTGGTGTGC TGGTGGCCGC CATCGTGGCG
GGCGGCATTT GCGTGTCGGC GTGGCACGGT GTCGGCTACA CCGAGATGGC CACGCTGGCG
GGCGCGCAGC GCGCCGGCAC GGCGCTGGGC CTGGGCAATA CGGGGGCCTT TGCAGCGCTG
GGGCTCACGT CGCTGTTTTT GCCGCATGTG CTGGCATGGT CGTCCTGGCC GGTCGTGTGG
CTCTTGGCGG CGGGCTGCGC CCTGATCGCA TGGCGGGTGC TGCCTGCCGC CGATCGATAG
 
Protein sequence
MTTAVLSSSA AGQFSRHHRW KVLGVGVAAN ASFSAAFSGI PTTAVFIRSA YHLGNAELGI 
ALGLLGLGIA ISELPWGLLT DRWGDRTVLL AGLGLTALAL LLMAGFAAPA HGNVPPLTWL
AAGMLSVGLL GGSVNGSSGR AVMGWFREGE RGLAMSIRQT AVPLGGGIGA LVLPSLAAHA
GFAAVYGVLA AACALTAVLT WLWVHEAAPA ADAGVARVVS EGPGPLRDVM LWRMALAIGL
LCVPQGAVVA FATVFLRDFA HADVLTLSLT MAAVQGGAAV MRVWSGRWTD RHGNRRAYLL
ACARLSAALF VVLAGVAWLT GTLHADLAVM RGVLVAAIVA GGICVSAWHG VGYTEMATLA
GAQRAGTALG LGNTGAFAAL GLTSLFLPHV LAWSSWPVVW LLAAGCALIA WRVLPAADR