Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4780 |
Symbol | |
ID | 6285405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1116930 |
End bp | 1117673 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642619256 |
Product | protein of unknown function DUF1275 |
Protein accession | YP_001893291 |
Protein GI | 187926946 |
COG category | [S] Function unknown |
COG ID | [COG3619] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.928873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATCC AATACCTCCG ACGCCTGACG GGCACCGAGC GCACCGACGA CGCCAACCGG CGCCTCGGGC AGTCGCTCGC CTTCGTGGCC GGTGCCGCCA ATGCGGGTGG TTTTCTCGCG GTCAAGCAGT ACACGTCCCA CATGTCCGGC ATCGTTTCGG CGATGGCGGA CGATCTCGTT CTGGGCAACG CGGTCCTCGT GCTGGCGGGT TTTGCCTCGC TGCTGGCGTT CGTGTGCGGC GCAGCCTGCA CGGCCGTCAT GGTCAACTGG GGACGCCGCC GCAGCACGCA CAGCGAATTC GCATTGCCGC TGATGCTCGA GGCCGGGCTG TTGCTGCTCT TCGGTCTGAT GGGCACGTCG CTCGGGCAAT ACCGCGTGGT GTTCGTACCG GCCACGGTGG CATTGCTGTG TTTCATGATG GGCCTGCAGA ACGCGATCAT CACGAAAATC TCGAAGGCTG AGATCCGGAC CACGCACGTG ACGGGGCTGG CCACCGACAT CGGGATCGAG ATCGGCAAGG CGCTGTACTG GAATCAAGGC CACCGCAATC TGCCCGCCGT GGTCGCCAAC CGGCCCAAGC TGCGGCTGCT GGCCTCGTTG CTGGCGATGT TCTTCGTGGG CGGGGTGACG GGCGCGCTGG GATTCAAGCA CCTGGGTTAT GCCGCCACCA TTCCGCTGGC GTCGATCCTG ATGCTGCTGG CCGTGGTGCC GGTGGTGGAT GACTTGCTGG CACGCCGTCG GTAA
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Protein sequence | MPIQYLRRLT GTERTDDANR RLGQSLAFVA GAANAGGFLA VKQYTSHMSG IVSAMADDLV LGNAVLVLAG FASLLAFVCG AACTAVMVNW GRRRSTHSEF ALPLMLEAGL LLLFGLMGTS LGQYRVVFVP ATVALLCFMM GLQNAIITKI SKAEIRTTHV TGLATDIGIE IGKALYWNQG HRNLPAVVAN RPKLRLLASL LAMFFVGGVT GALGFKHLGY AATIPLASIL MLLAVVPVVD DLLARRR
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