Gene Rpic_4743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4743 
SymbolfliE 
ID6285269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1083416 
End bp1083742 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content60% 
IMG OID642619219 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_001893254 
Protein GI187926909 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.743066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCT CCAACGCCCA TTCCGTGGTC TCGCTGATGA ACAGCGTGCT GGCGCCGTCC 
ACTGTCGGCG GCAGCACAGC CAGTGGCGAA ACCGGCAAAC CCAGCGTCGA CTTCGGCTCC
GTGCTGAAGT CGTCGCTGGA CCGTGTTGAC GCCTCGCAGC AGAAGGCCGA GGCCATTTCG
CGCAGCTTTG AGATGAGCAA CAACGATGTC GACCTGCATG ACGTGATGCT TTCGCTGCAG
AAGGCCAATA TCGACTTTCA GACTGCCGTG CAGGTGCGCA ACAAGCTGGT GTCGGCGTAC
CAGAGCATCA TGAGCATGTC GGTCTGA
 
Protein sequence
MDLSNAHSVV SLMNSVLAPS TVGGSTASGE TGKPSVDFGS VLKSSLDRVD ASQQKAEAIS 
RSFEMSNNDV DLHDVMLSLQ KANIDFQTAV QVRNKLVSAY QSIMSMSV