Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4656 |
Symbol | |
ID | 6285410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 986174 |
End bp | 987709 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642619133 |
Product | anaerobic nitric oxide reductase transcription regulator |
Protein accession | YP_001893168 |
Protein GI | 187926823 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.836475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATC GCCTGCTCTT GACCGACCTG GTTGCCGATC TGCCGCCCGC TGTCCGCATG CAGCGACTGG TGGGCAGCCT GCGCACGCAC TTTCGCTGCG GGGCCGTAGC GTTGCTGAAA CTCGAGGAAG ACCACCTGCG GCCGGTGGCC GTGGATGGCC TGGTGCGCGA TGCGCTGGGC CGGCGCTTCG TGGTCGGACA GCACCCGCGG CTGGCCGCCA TCCTGGCGCG ACATGGCGTG ACATGCTTCC ACCACGACAG CACCCTGCCC GATCCATACG ACGGGCTCAT TGACGAACAG GCAGGCGTGC CATTGCCGGT GCACGACTGC ATGGGTCTCG GCTTGCAGGT GGAGGGCCGG CCCTGGGGCG TGCTGACGCT GGACGCGCTC AAGGTTGGCA CGTTTGACGC GGATGCGCAG GCCGAACTGG GCCGCCTGGC TGTCGTGGTG GAAGCGGCCG CGCGCACCAC GCGGCTCGAG GCGGAGATCC GTGCGCTGCG TGCCACGCGC GCTGATTCGC CCGCCGGCGA CGCCACCACC GACGCAAGCG AAATCGTTGG CCAGAGCCCT GCCATCCACC AGTTGCTGCA CGAGCTGGAA GTGGTGGCCG ATTCTGAACT GCCGATCCTC GTGCTGGGCG AAACCGGCGT CGGCAAGGAG CTGTTTGTCC ACCGTCTGCA TCGCCTGTCG CGCCGGCGCG ATCGTCCGCT GGTGCATGTC AATTGCGCGG CGCTGCCGGA GTCGCTGGCA GAGAGCGAAC TGTTTGGCCA TGTCAAAGGC GCCTTCTCGG GCGCCACGGG AGAGCGCCCC GGTCGCTTTG AGGCGGCGGA CGGCGGCACC CTGTTCCTGG ACGAGGTCGG TGAACTGCCG CTCACGGTGC AGGCGAAGCT GCTGCGCGCC CTGCAGAACG GCGAGATCCA GCGGCTCGGC GCCGACCGCC CCCGCCACGT CGACGTACGG GTCATTGCAG CGACCAACCG CAACCTGCGC GAGCGCGTGC GCGATGGCGC GTTCCGGGCC GACCTCTATC ACCGGCTGTC GGTGTATCCG GTGCCGATTC CGCCGCTGCG CGAACGCGGT AACGACATCC TGCTGCTCGC TGGCCGGTTT CTGGAGCACA ACCGGGCGCG TCTCGGCTTG CGCAGCCTGA GGCTCAGCCC GGATGCCGAG CGCGCCCTGC GCAGCTATCC ATGGCCCGGA AACGTGCGCG AGCTGGAACA CGTGATCAGC CGCGCCGCGC TCAAGGTACT GAGCCGGGGC GCGCGCCGCG ATGACATCGT GACGCTGGGT GCCGAGCTGC TCGACCTCGA CACGGAGGTC GCCTCACCCG ACACGTCATC GCCCGACGTG CCGCAGGATG TCCGCCCCGG CACGCCCCTG CGCGACGCCG TTGCCGACTT TCAGCGACGC TGCATCGAAT CGGCATTGGC CACGCACGAT GACAACTGGG CGCGGGCGGC GCGGGCCCTC GGGCTGGATG CAAGCAACCT GCACAAACTG GCAAGACGCC TGGGGCTGAA ACCGGCGGAC GGTTGA
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Protein sequence | MIDRLLLTDL VADLPPAVRM QRLVGSLRTH FRCGAVALLK LEEDHLRPVA VDGLVRDALG RRFVVGQHPR LAAILARHGV TCFHHDSTLP DPYDGLIDEQ AGVPLPVHDC MGLGLQVEGR PWGVLTLDAL KVGTFDADAQ AELGRLAVVV EAAARTTRLE AEIRALRATR ADSPAGDATT DASEIVGQSP AIHQLLHELE VVADSELPIL VLGETGVGKE LFVHRLHRLS RRRDRPLVHV NCAALPESLA ESELFGHVKG AFSGATGERP GRFEAADGGT LFLDEVGELP LTVQAKLLRA LQNGEIQRLG ADRPRHVDVR VIAATNRNLR ERVRDGAFRA DLYHRLSVYP VPIPPLRERG NDILLLAGRF LEHNRARLGL RSLRLSPDAE RALRSYPWPG NVRELEHVIS RAALKVLSRG ARRDDIVTLG AELLDLDTEV ASPDTSSPDV PQDVRPGTPL RDAVADFQRR CIESALATHD DNWARAARAL GLDASNLHKL ARRLGLKPAD G
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