| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4650 |
|---|
| Symbol | |
|---|
| ID | 6285130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 979488 |
|---|
| End bp | 980888 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642619127 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001893162 |
|---|
| Protein GI | 187926817 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC GGACGAATCC TGTTCCAGAT GCCGGTCTGA AACGCCTGAC CTCGCGTGCC
ATCACGTTAA TGGACTGGAT ACTTGCCCCT GCAGTGATTG CCGGTTTGCT CGGGGCTTAT
CTGCAGTTGG AGCAGTGGAT TATTTCCGCC AATGGTTGGT GGGCCTTCAT TTTCATCTCG
ATACCGGTCG GCGCCGTGTC GTACAGCTAC GCACATTATC TGGAGGAAAT CCGGGGCCTT
GTTGCTTCGG CATGCCAGAG TGCGCAGCGG GTGGAGCGCA ATCGTCACCG CCTTGAGGGA
ATCATCCGTG CCTCGATGGA GGCGATCATC ACGATCGACG AGTCGCAGCG CATTGTCCTG
TTCAATCCGA GGGCCGAGGG CTTATTTGGA TACCGCGCCG AAGACGTGCT TGGCGCCCCC
ATTGAACAAT TGATCCCGCA GCGTTTTCGT GAGGCTCATC GGAAGCTGGT GCAGCGCTTT
GGCGTGACGC CCTCGAGCGA GCGCAGGATG GCGGGCCAGC GGGAAGTGTT TGCGCTGCAT
GCCGACGGCC ACGAGTTCCC GATCGAGGCG TCCATCTCGC ATTCGGAAGA AGACGGGAAG
AAGCTGTACA CGATCATGCT GCGCGACATC ACGGAGCGCC TGAAGGCTGC CAAGGCATTG
AGCCGCTCGC AGGAGGAGCT TCGCTACCTT GCGGACTCCA TCCTCGTCGT GCGCGAGGAA
GAGCAGCGGC GCATTGCGGA CGGGCTCAAC CAGAGCCTCG GACGTCGGTT GAATACGCTG
CATGAAGACT GTGCAGCGCT GTCCGCGCAG CTTCGGTGGG CAGGGCACGT TCAATGTAAA
GACGGTCTGG CTGGCATTCA GGCAAATATT GACGCAGCAG AGATCTCCCT CCGGCGCATC
TGCATGGACC TCCGCCCACA GGTGCTGGAT GAGCTTGGCC TGGTGCCGGC TGTGCATTGG
ATGGTCACGG ACTTCGAGGC GCGCTATCAG ATTCCGGTCA CACTCGACGT GGAGCCGATT
GATTTTGATG GGCGCACGGC CAATGCGCTG TTCCGCATCA TTCAGGAAGC GTTGACCAAC
GTTGTCAGGC ACGCACACGC AACAGCGGTC AGGATCCGCC TGCGGAAAAC GGGTGCCACG
TGCGAGGTGA GCATCGTCGA CAACGGCGTG CACAGCCCGT CGCTGGCGCT GCCTTGCGCG
CGCTCCGGCC TCGGCCTGAT CGGTATTCGC GAGCGCGCGC GCCTGCTGGG TGGCGCTGCA
CAGACTGAAC AGGAGGATGG CACCGGCTTT CGGGTGAGGG TGGTGTTTCC ACTGCACAAG
CGCATGGCGC ACGCGCTCGA CAGCCTATGC AGCGAGTCCG GCGAAAACCC GCGGCACTCC
ATCGACGAAC TGGATGCATG A
|
|---|
| Protein sequence | MSKRTNPVPD AGLKRLTSRA ITLMDWILAP AVIAGLLGAY LQLEQWIISA NGWWAFIFIS
IPVGAVSYSY AHYLEEIRGL VASACQSAQR VERNRHRLEG IIRASMEAII TIDESQRIVL
FNPRAEGLFG YRAEDVLGAP IEQLIPQRFR EAHRKLVQRF GVTPSSERRM AGQREVFALH
ADGHEFPIEA SISHSEEDGK KLYTIMLRDI TERLKAAKAL SRSQEELRYL ADSILVVREE
EQRRIADGLN QSLGRRLNTL HEDCAALSAQ LRWAGHVQCK DGLAGIQANI DAAEISLRRI
CMDLRPQVLD ELGLVPAVHW MVTDFEARYQ IPVTLDVEPI DFDGRTANAL FRIIQEALTN
VVRHAHATAV RIRLRKTGAT CEVSIVDNGV HSPSLALPCA RSGLGLIGIR ERARLLGGAA
QTEQEDGTGF RVRVVFPLHK RMAHALDSLC SESGENPRHS IDELDA
|
|---|
| |