Gene Rpic_4641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4641 
Symbol 
ID6285160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp968554 
End bp969303 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID642619118 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001893153 
Protein GI187926808 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.220796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG CCATACAAGC CGGCGTGTCC GGCACGCACC TCGGCAGCGC GGCCACCGCT 
GCGCCTGCCG AACCCGAAAT CCCCCGTACC CTGTGCGAGC GCGCTTACCT CGACCTGCGA
CAGGACATCG TGCAGGGGCG CCTTGCTCCG GGCGAGCGCC TGCGCGTGGA GCATCTGAAG
GATCACTACA GCGTCGGGGC CGGCACGTTG CGTGAAGCGC TGGCGCTGCT CGTCTCGGAT
GCGCTCGTCA CGGTGGAGGG GCAGCGGGGG TATCGGGTGA CCGACATTTC GCTGGCGGAC
CTGCAGGATC TGACCGACAC GCGAGTGATG CTGGAAACCG AGGCCATCCG TTTGTCCATC
CGCCATGGAG ACGCCGAATG GGAGGCCCAT CTGCGCGCCG CCTTCGATGC GCTGAGCGAC
GCGGAAGCCC GAGGCCCGTC TGCCAACCCC GAGCATTGGG AACGTGCCAA CCGGCATTTC
CACCAGGCAC TCATCGCCGC GCACCGCTCA CCGTGGAGCA AGTACCTGCT GGAACTGCTC
TACCGCCACG GCGAGCGTTA TCGGCACGTG GCCATCCGCC TGGGCAGCGC GCAGCCAAGC
AGCCGCAACG TGCATGAGGA ACATACGCTG ATCTTCGAGG CCGCCCTGGC CCGGCAGGAA
GCGCGTGCCG CATTGGCGCT GGAAGCGCAT ATCCGGCTCA CGCACGAATT GCTCGTCAAG
CTGGGGCTCG GCATGACAGC AGAAGCATGA
 
Protein sequence
MKRAIQAGVS GTHLGSAATA APAEPEIPRT LCERAYLDLR QDIVQGRLAP GERLRVEHLK 
DHYSVGAGTL REALALLVSD ALVTVEGQRG YRVTDISLAD LQDLTDTRVM LETEAIRLSI
RHGDAEWEAH LRAAFDALSD AEARGPSANP EHWERANRHF HQALIAAHRS PWSKYLLELL
YRHGERYRHV AIRLGSAQPS SRNVHEEHTL IFEAALARQE ARAALALEAH IRLTHELLVK
LGLGMTAEA