Gene Rpic_4560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4560 
Symbol 
ID6285718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp894325 
End bp895143 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content67% 
IMG OID642619041 
ProductMethyltransferase type 11 
Protein accessionYP_001893077 
Protein GI187926732 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.605076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAC ATGGCACCGA CAAGGTCTTC AGCGGGTCGA TACCGGCGCT GTACGACACG 
TTGATGGTTC CGCTGATCTT CGAGCCATAC GCTGCCGATC TCGCGGCGCG CTCGGCCGCA
TTGGCGCCCA CGCGCGTGCT GGAGGTTGCT GCGGGAACGG GCGTCGTGAC GCGGGCACTG
TCGCGTGCCC TGCCCGAGGC GAGCACCCTT GTCGCGACCG ACCTCAATCC AGCGATGCTC
GAACGGGCTG CCGCCGTCGG TGCAGACCGG CCAGTGACGT GGCAGCAGGC CGACGCACAG
CAACTGCCCG TCGACGATGC CAGCGTCGAC ATGGTGATCT GCCAGTTCGG CGCGATGTTC
TTTCCGGACC GGGCGAAGGC GTTTGCAGAA GCCCGTCGCG TGTTGAAGCC GGGTGGAACG
CTGCTCTTCA ACGTGTGGGA CCGCATCGAG GAAAACGCGT TCGCGCACGT GGTGACGCTT
GCGCTGGCGG CGCACTTTCC CAATCACCCT CCGGCGTTTC TCGCGCGCAC GCCGCATGGC
TATCACGATC CGTCGCGCGT TGAAGCCGAT CTGCGCCTTG ACGGTTTCGC AAGCCCGGTC
ACGTGCGACA TCGTGACCGC GCGCAGCCGC GCGGATACGG CGCGCACGCC GGCGTTTGCC
TACTGTCATG GCACGCCGCT GCGCAACGAG CTGGAAGCGT TCGGCCCCGA TGCGCTGTCC
GAAGCCACCG ACCTCTGCAC GCAAGCACTC GCCGCGCAAT TCGGTGCTGG GCCCGTGGAC
GGCAAGATCC AGGCGCTCGT CTTCAGTGTC ACGGCCTGA
 
Protein sequence
MQAHGTDKVF SGSIPALYDT LMVPLIFEPY AADLAARSAA LAPTRVLEVA AGTGVVTRAL 
SRALPEASTL VATDLNPAML ERAAAVGADR PVTWQQADAQ QLPVDDASVD MVICQFGAMF
FPDRAKAFAE ARRVLKPGGT LLFNVWDRIE ENAFAHVVTL ALAAHFPNHP PAFLARTPHG
YHDPSRVEAD LRLDGFASPV TCDIVTARSR ADTARTPAFA YCHGTPLRNE LEAFGPDALS
EATDLCTQAL AAQFGAGPVD GKIQALVFSV TA