| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4517 |
|---|
| Symbol | |
|---|
| ID | 6285841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 843146 |
|---|
| End bp | 844081 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642618998 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001893034 |
|---|
| Protein GI | 187926689 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.408069 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACG ATTTGGCTCT CTTTGTTTCC ATCGTGGACC ACGGCAGCCT GCAGGCCGCG
GCCCGTCATG CCAACCTGCC GCCCGCCACG CTCACGCGGC GCCTGCAGAA GCTCGAGACA
GCGCTTGGTT GCCAGCTTCT GCTGCGCAGC GCCCGCAGCC TGAAGCCCAC GCCGGAAGGC
CAGCTTTATT ACGAGCAATG CCGCCCGCTG CTGACCGCGC TTGCGCAAAC CACAGCCACG
CTCGACGACG ATCTCAACCA GGTGAAGGGC ACCCTGCGCG TGCTGGCACC GCTGAACCTG
TCGCGCGGCC TGTTTGCGCC CGCCTATGCG AGTTTCATGG CGATGTGGCC CGAGATCCGG
CTGGAGCTGT CGCTGAGCAA CCGCAATGAA GACGTGTGGC GGCACGGCGC TGATCTCGCC
ATCCGTGTCG GCCAGCAGGA TGACCCGAAG CTGCGGCAGC GCCGGCTGGG CGTAATCGGG
ATCGTACTGG TGGCGTCGCC AGCCTACGTG GCGGCACACG GCATGCCGGC ACACCCGCGT
GATCTGGCGG CGCATCGGCT GCTGGTGGCG TCGCCCATCT CCACCTGGCG CTTCACGTCG
CCCGACGGCA AAGAGACCAT CGAAATGCAG CCCGAAGCCC AATGCGAGGT GAACGATATT
GAAATGGCAG CCGCCCTCGC GGAAGCCGGG CAAGGGCTGC TGTATTGCCC GCGCACCCTA
TGCCATCGGG CGCTGGAGGC CGGCCAACTG GTGCGCGCCC TGCCTGATTG GCGCACACCG
CAGCGCCCGA TCTATGCTGT GTGGCCGCAG CAACAACTGC CCCGCAAGGT GCGAACCTTG
CTGGAGCATC TGGCCGAGTT CGCAGCGGCA AACCCGCTGC TGCAGGACTA TCCCGACGCG
ACAGCCTCAT CGCTCGCACA CCCGCACACG GTGTGA
|
|---|
| Protein sequence | MLDDLALFVS IVDHGSLQAA ARHANLPPAT LTRRLQKLET ALGCQLLLRS ARSLKPTPEG
QLYYEQCRPL LTALAQTTAT LDDDLNQVKG TLRVLAPLNL SRGLFAPAYA SFMAMWPEIR
LELSLSNRNE DVWRHGADLA IRVGQQDDPK LRQRRLGVIG IVLVASPAYV AAHGMPAHPR
DLAAHRLLVA SPISTWRFTS PDGKETIEMQ PEAQCEVNDI EMAAALAEAG QGLLYCPRTL
CHRALEAGQL VRALPDWRTP QRPIYAVWPQ QQLPRKVRTL LEHLAEFAAA NPLLQDYPDA
TASSLAHPHT V
|
|---|
| |