Gene Rpic_4460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4460 
Symbol 
ID6285657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp775434 
End bp776273 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content67% 
IMG OID642618939 
Producthypothetical protein 
Protein accessionYP_001892980 
Protein GI187926635 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.236851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.370588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG TCTTCTCTAT CGAGCGCCCC GCATCGTCCA CGCTCAAGCT GAACAGCACG 
CCGCAGCAGA AATTCTGGTT TGATCCGCCC GCCACGCGCC CCACGCTCGA GGCCGAGCGG
CGCCATCGGC AGGAGCGGCT TGCGGGGGCG TTCCGCCTGT TTGCGCGGCA CGGCTTTGAC
CTCGGGCTGG CGGGCCACAT CACCGCGCGC GACCCGGAGT TGACGGACCA CTTCTGGGTC
AACCCGCTGG GGGTGCATTT CTCGCGCATC AAGGTGACGG ACCTGCTGCT CGTGAACGCG
CGTGGCGAGA CCGTCATCGG CAACCGGCCG CTGAACAAGG CGGCGTTTGC GATTCATGCG
GCGATTCACG AAGCGCATCC GCACATCGTG GCTGCGGCGC ACACCCATTC GACCTACGGC
AAGGCGTGGT CGACCCTGGG CCGGCCGCTG GATCCGCTCA CGCAGGATGC ATGCTCGTTC
TATGAAGACC ATGCGCTGTT CGACGACTTC ACCGGCATGG TGGTCGATTC CAGCGAAGGC
GAGCGCATTG CGCATGCCCT CACCAAGCCC GACGGCGGCA CGCACAAGGG CGTGATCCTG
AAGAACCACG GCATCCTCAC GGCAGGCCCG ACGTTGGAAG CCGCAGCGTG GTGGTACATC
GCGCTGGACA ACGCTGCCCA CACGCAACTG CTTGCCGAAG CCGCGGGCAC GCCGCAGCCC
ATCGATGCCG CCACCGCGCG CCACACCCAC AGCCAGGTGG GCGGCCAGGA GGGTGCGCTG
CACGCGTTCG AAAGCCTTTA CGCCGGCCTG GTCGCGGCCG AGCCGGACGT GCTCGATTAA
 
Protein sequence
MSAVFSIERP ASSTLKLNST PQQKFWFDPP ATRPTLEAER RHRQERLAGA FRLFARHGFD 
LGLAGHITAR DPELTDHFWV NPLGVHFSRI KVTDLLLVNA RGETVIGNRP LNKAAFAIHA
AIHEAHPHIV AAAHTHSTYG KAWSTLGRPL DPLTQDACSF YEDHALFDDF TGMVVDSSEG
ERIAHALTKP DGGTHKGVIL KNHGILTAGP TLEAAAWWYI ALDNAAHTQL LAEAAGTPQP
IDAATARHTH SQVGGQEGAL HAFESLYAGL VAAEPDVLD