| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4415 |
|---|
| Symbol | |
|---|
| ID | 6286034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 721530 |
|---|
| End bp | 722567 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618895 |
|---|
| Product | Alcohol dehydrogenase GroES domain protein |
|---|
| Protein accession | YP_001892936 |
|---|
| Protein GI | 187926591 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.742114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAC TTGTCTACGA GGGGCCTGGC AAGATCACCC TGGCCGACAA GCCGAAACCG
GAGTTGCAGG CACCCGGCGA CGCCGTGGTG CGCGTCACGT TGACCACCAT CTGCGGCACC
GATCTGCACA TCATCAAGGG CGACGTCCCG ACCTGCGAGC CGGGGCGCAC GCTGGGCCAC
GAAGGCGTGG GCGTGGTGGA ATCGGTCGGC GCGGCCGTGA CATCGCTACA GCGGGGTGAT
CACGTGCTGA TCTCGTGCAT TTCGTCTTGC GGAAAATGTG CGAATTGCCG GCGTGGCATG
TACTCGCATT GCGAGACGGG CGGCTGGATC CTGGGACATC GCATCGACGG CGTGCAGGCC
GAGTACGTCC GCATTCCGCA TGCGGAGACC AGCCTCTACA AACTGCCGCC GGGCGTCGAT
GAAGAGGCGC TGGTCATGCT GTCGGACATC TTTCCGACCG GATTCGAATG CGGTGTGCTC
AATGGCCGCG TTCAGCCGGG CAACAGCGTA GCGATTGTCG GCGCAGGCCC CATCGGGCTG
GCCTCGCTGC TGACGGCGCA GTTCTACTCG CCGGCGCAGA TCATCATGAT CGACACGAAC
GCGGCACGGC TGGAAGTGGC CACCAGGCTG GGCGCAACGG CGTGTATCGA CGTCTCCAGT
GAAGGCGCCG CAGCCGCCGT GAAGCGGCTC ACGGATGGCG TGGGCGTCGA CTGTGCGATC
GAGGCGGTGG GCGTGCCCGC GACGTTCGAG CTCTGCCAGC AACTGGTTGC GCCAGGTGGC
GTGATTGCAA ATATCGGCGT GCATGGCGTC AAGGCGGACC TTCACCTGGA AACCTTGTGG
AGCCAGAACA TCGCCATCAC CACGAGGCTG GTGGATACCG TCAGCACGCC GATGCTTCTG
AAAACGGTAC GTGCGGGGAA GCTGCTGCCT GGGCGGCTCA TTACGCACCG GTTCAGGCTC
GATGACATCC TCGCCGCCTA CGACACGTTC CGCAACGCGG CAAAGACGCA GGCGCTCAAG
GTGATCATCT CCGCATAG
|
|---|
| Protein sequence | MKALVYEGPG KITLADKPKP ELQAPGDAVV RVTLTTICGT DLHIIKGDVP TCEPGRTLGH
EGVGVVESVG AAVTSLQRGD HVLISCISSC GKCANCRRGM YSHCETGGWI LGHRIDGVQA
EYVRIPHAET SLYKLPPGVD EEALVMLSDI FPTGFECGVL NGRVQPGNSV AIVGAGPIGL
ASLLTAQFYS PAQIIMIDTN AARLEVATRL GATACIDVSS EGAAAAVKRL TDGVGVDCAI
EAVGVPATFE LCQQLVAPGG VIANIGVHGV KADLHLETLW SQNIAITTRL VDTVSTPMLL
KTVRAGKLLP GRLITHRFRL DDILAAYDTF RNAAKTQALK VIISA
|
|---|
| |