| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4375 |
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| Symbol | |
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| ID | 6285978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 677775 |
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| End bp | 680888 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618856 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_001892897 |
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| Protein GI | 187926552 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCCC GCCTGATTGA GTTTTCGTTG CGCCAGCGCG TGCTGGTGCT GATCGCGGCC
GGTGTGCTGG CTGCCGCCGG CGTCTGGGCG TATCTGAACC TGCCGATCGA CGCGTTTCCC
GATATCTCGC CGACACAGGT CAAGGTTGTG CTGAAGGTGC CGGGCATGAC GCCTGAGGAG
GTCGAGCAGC GGGTCTCGAC GCCGATCGAA CAGGAGCTGC TCGGCCTGCC GCACAAGACG
ATCGTGCGCT CGGTGTCCAA ATACGGCATC AGCGATGTGA CCGTCGATTT TGAAGAGGGG
GTGGACGTCT ACTGGGCGCG CCAGCAGGTA TCAGAGCGTC TGGCCGGCTT GGCGCGCGAT
CTGCCGTCGA CGGCTGTGGG CGGCCTGGCG CCCATCACCA CGCCGCTGGG CGAGATGTTC
ATGTTCACGG TGGAGGGCGA TGGCTATTCC TTGGCCGAGC GGCGCCGCGT GCTGGACTGG
GTGATCCGGC CAGCGCTGCG CACCGTGGGG GGTGTGGCCG ACGTCAACGC CCTCGGCGGC
GAGGTGCGCA GCTATGAGGT GACACCGGAC CCGGCGCGGT TGCGCGCACG CGCTATCACC
CTTGACCAAT TGCGCCAGGC GCTGGACGCC AACAACCGCA ACGACGGAGC AGGGCGGCTG
GATCGCGGCG ACGAGCATTG GGTCGTGCGT GTAGAAGGCG GCGTGCGCGG GCTGGATGAT
CTGCGTGCGA TTGTCGTGGT GCCGGCACAG GGCCTATCTT CCGCGCCTGC GGTCACGGTC
GGCGATGTGG CAACCGTGCG GCTGGGCGAG GCGACCCGCA ACGGCGCTGT CAGCAAAGAC
GGCAACGGCG AAGCGGTTGA AGGACTGGTG CTGGGCCTGC GCGGCAGCGA TGCCCGCAAG
CTGGTCGAGG CGGTACAGGC GCGGCTCGAT GCGCTCGGCC CGCAGTTGCC AAAGGGCATG
TCGACCCACG TCTTCTACAA CCGCGGCGAG CTGGTCACCC GTGCGGCCAA TACCGTGGTT
CGCGCGTTGA TTGAAGCCAG CGTGCTGGTC GTCATTACGC TGTATTTGTT CCTGGGTGGG
GTGCGGGCAG CCCTGGTCGT GGCGGCCACT CTGCCGCTGT CGATGCTGGC GACCTTTCTC
CTGATGCGCT ATGTGGGTCT GACGGCCAAC CTGATGAGCC TTGGCGGGCT CGCCATTGCA
CTGGGCATGC TCGTCGATGC GGCCGTCGTC GTGGTCGAGA ACATCGAGAC GGCCATGGCG
CGCGCGCAAG ACCACAAGAC AGATCCGGCG CTGCGCGGTG CGGTCATCCG CCATGCAGTG
GCAACGGTAG CGGTACCCAT GCTGTCGGGC GTGTCGATCA TTGCCATCGT GTTTCTGCCG
CTGCTGTCAT TGCAAGGGTT GGAGGGCAAG CTCTTCGGGC CGGTGGCGCT GACCATCGTG
CTGGCGCTGG CCTCGTCCGT GGTGATTGCC TTTACGGTGG TCCCGGCCCT CGCTTCCTTG
CTCTTGCTTT CACATGCGGA TGAACCGCCC TGGCTGATGC GGAAGGTCGC GAGCGGTTTC
GCGCGAATCC AGGCATGGAC GACAACGCAT CGCCGCACGG TGTTCGGGCT GGCCGGGGCA
GCATTGGCGC TGGCCGTGGT GTTGTACATG TCGGTCGGCA AGACCTTCAT GCCGACGATG
GACGAGGGCG ATCTGATCGT GCAGTTGCAG AAGGCCCCGT CTGTTTCGCT CGCGGCGTCG
CTCGACATGG ATCAACGTGT GCAGCAGGCG CTCCTCAAGG AGGTGCCGGA AATACGCTCG
ATCGTCGCGC GCTCGGGTTC GGATGATCTT GGGCTGGACC CGATGGGCCT GAACGAAACC
GACACCTTCC TGGTGCTCAA GCCCAAGGAT CAGTGGCGCG GTAGCAAGGA AGACATCGCG
GTAGCCATCC GGCGCGTCAT GGAGCGCTTC CCGGGCGTGA TCTACGGCTT CACGCAGCCC
ATTGAGATGC GTGTCTCAGA GATGCTGACC GGCACACGCG GCGACGTTGC CATCAAGCTC
TTCGGCAGCG ACCTTGCCGC CATCGATGCA GCGGCGCAGG CCATCGCTGC CAAGGTCCGC
ACCATCCCGG GTGCGGCAGA GGTGATTGCG CCCAACAACA GCGGCGTGCA GTACCTGAAG
GTGTCGCTGG ACCGGGCGGC CGTCGGTCAG GCTGGCTTCT CCGGCGACGC GCTGCAGGCG
CAACTGCGGG CGCTGATCGA GGGCGACCGG ATTGGCGTGG TGCCCGAGGG CATCGTCCGC
ACGCCGTTGA TCTTGCGTGG CGGAGCAGGC TTGCGGCAGG CACCCGAAAA TCTGACCAGC
CTTCTGGTGA CGGCACCCGA CGGAAAAGCA TGGCCGCTCA CCTCTCTGGC GCATATCGAG
CGCGTGGATG GGCCTGTGCG CATCAACCAT GAAGACGGCG CCCGGTTTGC CGTGATCCAG
GCCAATGTCG ATGGTCGGGA CCTGGCCGGC TTCGTGCAAG AAGCCCAGGC AGCAGTCGGC
GGCATTGGCA CGTTGCCAAA AGGATTGCGC GTCGTGTGGG GCGGCCAGTT TGAGAACCAG
CAACGCGCCG CAGCGCGCCT TGCGCTGGTT GTTCCATTGG CCCTGGGCGC AATCTTCCTC
TTGCTGATAT TGACGTTTCG CTCGGTGCGG CAGGCCGTGC TGGTGGTCGC CAACATTCCG
TTCGCGCTCG TGGGCGGCAT TGCTGCGTTG CGGATATCGG GTGAATACCT ATCGGTGCCC
GCCTCCGTGG GCTTCATCGC GTTGCTCGGG ATCGCGGTGC TCAACGGCGT GGTGCTGGTC
TCCCACTTCA ACACGCTGCT GGAGTCCGGC CTGGGCATGG CGCAAGCCGT ACGCGCCGGC
GTGCGAGACC GCCTGCGGCC CGTCCTGATG ACGGCCTGCA TTACCGCGCT GGGGATGATT
CCGCTGCTGC TGGCCAGCGG GCCAGGGTCA GAAATTCAGC GGCCGCTGGC GATCGTCGTG
TCAGGTGGGC TGATCTCTTC GACTGCGCTG ACGCTGCTTC TTCTGCCCCT GCTGTTTGAA
CGCTTTGGGT TGCCTCGGCC GCGTGCGGCT GCGGGGCAAG GAGATTCACA ATGA
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| Protein sequence | MLPRLIEFSL RQRVLVLIAA GVLAAAGVWA YLNLPIDAFP DISPTQVKVV LKVPGMTPEE
VEQRVSTPIE QELLGLPHKT IVRSVSKYGI SDVTVDFEEG VDVYWARQQV SERLAGLARD
LPSTAVGGLA PITTPLGEMF MFTVEGDGYS LAERRRVLDW VIRPALRTVG GVADVNALGG
EVRSYEVTPD PARLRARAIT LDQLRQALDA NNRNDGAGRL DRGDEHWVVR VEGGVRGLDD
LRAIVVVPAQ GLSSAPAVTV GDVATVRLGE ATRNGAVSKD GNGEAVEGLV LGLRGSDARK
LVEAVQARLD ALGPQLPKGM STHVFYNRGE LVTRAANTVV RALIEASVLV VITLYLFLGG
VRAALVVAAT LPLSMLATFL LMRYVGLTAN LMSLGGLAIA LGMLVDAAVV VVENIETAMA
RAQDHKTDPA LRGAVIRHAV ATVAVPMLSG VSIIAIVFLP LLSLQGLEGK LFGPVALTIV
LALASSVVIA FTVVPALASL LLLSHADEPP WLMRKVASGF ARIQAWTTTH RRTVFGLAGA
ALALAVVLYM SVGKTFMPTM DEGDLIVQLQ KAPSVSLAAS LDMDQRVQQA LLKEVPEIRS
IVARSGSDDL GLDPMGLNET DTFLVLKPKD QWRGSKEDIA VAIRRVMERF PGVIYGFTQP
IEMRVSEMLT GTRGDVAIKL FGSDLAAIDA AAQAIAAKVR TIPGAAEVIA PNNSGVQYLK
VSLDRAAVGQ AGFSGDALQA QLRALIEGDR IGVVPEGIVR TPLILRGGAG LRQAPENLTS
LLVTAPDGKA WPLTSLAHIE RVDGPVRINH EDGARFAVIQ ANVDGRDLAG FVQEAQAAVG
GIGTLPKGLR VVWGGQFENQ QRAAARLALV VPLALGAIFL LLILTFRSVR QAVLVVANIP
FALVGGIAAL RISGEYLSVP ASVGFIALLG IAVLNGVVLV SHFNTLLESG LGMAQAVRAG
VRDRLRPVLM TACITALGMI PLLLASGPGS EIQRPLAIVV SGGLISSTAL TLLLLPLLFE
RFGLPRPRAA AGQGDSQ
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