| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4373 |
|---|
| Symbol | |
|---|
| ID | 6285976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 675952 |
|---|
| End bp | 676476 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642618854 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_001892895 |
|---|
| Protein GI | 187926550 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.454062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCCG AACTGAAATA CTCCTTCACC ATGCGCGCGC TCCATTGGCT GGTGGTCCTG
GCGGTGTTGA TCGCCGTCGT GGCCATCGAA ATCATGGATT TCTTCCCGAA AGGCAGTGCC
GAGCGCGCAG CGCTATTCAT CATTCACCAG ACGGCGGGGC TTTCCTTGCT CGCTTTGATG
GTGTTGCGCC TGTTGGCCCG GGTGGCCACG CAGGCCCCGC CTCCCGTTCC GGGCACACCG
CTGATGCAGC TTGCAGCACG ACTTACGCAT GGCGCGCTCT ATGCACTGAT GGTTGGGATG
CCCGTTCTGG GCCTGTTGGC ACTGGCCTGG GGTGGCAAGC CGATCCAACC GTTCGGGCTG
GATCTGCCGC TGGCGGTTGC ACAAGACAAG ACGTTGGCGC ACTTGGCCAA GGAGGTGCAT
GAGTCGGGCG CCACGCTGGT CTATATCGCG GTGGGACTGC ATGCCGCCGC GGCGCTCTGG
CATGAATTCA CCCTGAAGGA TCGGCTGCTG CGCCGCATGA TCTAG
|
|---|
| Protein sequence | MQSELKYSFT MRALHWLVVL AVLIAVVAIE IMDFFPKGSA ERAALFIIHQ TAGLSLLALM
VLRLLARVAT QAPPPVPGTP LMQLAARLTH GALYALMVGM PVLGLLALAW GGKPIQPFGL
DLPLAVAQDK TLAHLAKEVH ESGATLVYIA VGLHAAAALW HEFTLKDRLL RRMI
|
|---|
| |