Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4176 |
Symbol | |
ID | 6285602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 449181 |
End bp | 450086 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618661 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001892702 |
Protein GI | 187926357 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAC TTCAACCTCT CGACATTCCG CTTGCGATTC CCCTGCCGTG GCCGATGCTT GACGCCGACG GGCAGTTGCT CGTCCCGAAG GGCGACGTCA TCCACTCGCC GGAGGAGATC GACCTGCTGT GCACGCTGCA CCGCCCGCAT CGGCTGGCGG ACGGCACGCC CGCGCCTGCA CCGGCGTTTG CAAACACGCA GTTCCCGAAC ACGATGTTCC CGGACATGGG CGACGACCCT GACGGTGAAC GCACGATCGC CATGGAACTG CTGGGCCTGC GCCCCGGCGG CATGCTGACC GTGCGCCTGA CCGCAGGCGC CGGCCAGACC AAGGGTGCCG CGCGCGTGAT GGGCTACAGC CCGCAGCGCC ATCTGCTCAT CACCATGCCC ACCGACAGCG GCCGCACGGT CATGCCGGTC AAGGACGAAC TGGTGGAAGT CCACGCTTTC TCGGGCGAGG GCATCGCCAG CTTCGAATGC ACGGTGATGG CGGTGTGCCG CATCCCGTTC GAATACGTCG TGTTGTCGCC GCCGCGGCGG ATCAAGAACC GCGCGTTGCG CAAATCGCTG CGCGTGCGCG CCAACGTGGT CGGCAAGATG CTGGTGAGCG GCGACCCGCC ACGCATGATC CATATCTCCG ACATCAGCAC CACGGGCGCG TCGTTCCGCT CGGCGCATCG GCTGGAAGTG AGCGGCGCAC CGGCGCGTCT GCGCTTCCGG GTGAAAACGC GCGACTACCA TTCCGAACTG GTGGCTGCTG CGCTGGTGCG CAGTGAAAAA CCGGCCGACC TGCCCAACGT GTATCAATAT GGCGTGGAAT TCGTCGAGTT GGTCGCCGCC CAAAAGATGC TGCTGCAGTG CTTTATCTAT GAACAGTTGC TTTGGGGTGG GCAGCGCATG GTGTAA
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Protein sequence | MLELQPLDIP LAIPLPWPML DADGQLLVPK GDVIHSPEEI DLLCTLHRPH RLADGTPAPA PAFANTQFPN TMFPDMGDDP DGERTIAMEL LGLRPGGMLT VRLTAGAGQT KGAARVMGYS PQRHLLITMP TDSGRTVMPV KDELVEVHAF SGEGIASFEC TVMAVCRIPF EYVVLSPPRR IKNRALRKSL RVRANVVGKM LVSGDPPRMI HISDISTTGA SFRSAHRLEV SGAPARLRFR VKTRDYHSEL VAAALVRSEK PADLPNVYQY GVEFVELVAA QKMLLQCFIY EQLLWGGQRM V
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