Gene Rpic_4159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4159 
Symbol 
ID6285574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp426765 
End bp428138 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content64% 
IMG OID642618644 
Productcytochrome bd ubiquinol oxidase subunit I 
Protein accessionYP_001892685 
Protein GI187926340 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.719863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCG ATCCCGTTGT CCTGGCGCGC ATCCAGTTTG GCGCCAACAT CACCTTCCAC 
ATCCTCTTTC CCACCATCAG CATTGCGCTG GCGTGGGTGC TTCTGTTCTT CAAGCTGCGC
TATCGCAAGA CCGGTGACGA GGCCTGGATG GCCGCCTATC GCCTTTGGGT GAAGGTCTTC
GCATTGACGT TCGCGCTGGG CGTGGTATCC GGCGTGACGA TGAGCTTTCA GTTCGGCACG
AACTGGCCTG GCTATATGAA TACCGTCGGC AATATCGCCG GGCCGCTGCT GGCGTATGAA
GTGCTGACCG CGTTCTTTCT GGAAGCCAGC TTTCTCGGGA TCATGCTGTT CGGCACGGGC
CGTGTGAGCC CGCGCATCCA CACATTCGCG ACATTCCTTG TCGCGTTGGG CACGACCATC
TCAGTGTTCT GGATCATCGC GCTCAATTCG TGGATGCAGA CACCCGCCGG CTACGTGATG
ATCGACGGCC GCGCGCATCC GCAAAGCTGG CTGGCGATCA TCTTCAACCC GTCGTTTCCC
TACCGGTTCA CGCACATGCT GCTGGCTTCG GGGCTGACGG TGTCGTTCCT GCTGGCGGGG
TTGTCCGCTT ACCGCTGGCT GCGCAACGAC CGCGGTGGCG ACGTGCGTGC GGCGCACAAG
ACCGGCGTGG TGCTTGCCGC CATGCTCATC CCGTTGCAGA TTGCCGCCGG AGATGCGCAC
GGCCTGAATA CGCTGGAGCA TCAGCCTGCC AAGCTGGCCG CGATCGAAGG CATCTGGCAA
ACCGAACGCG GTGTGCCGGC CGTGCTGTTC GGCATTCCCG ATGCAGCAAC GCGCAGCAAT
CGCCACGAGA TCGCGGTGCC GAAGGTGGCA TCGCTGTATC TCACGCACTC GCTCGACGGC
GAAGTGCGGG GGCTCGATCA GTTCGATCAG CATCCGCCCG TGCTGCCCGT GTTCTTCGCC
TTCCGCCTGA TGGTGGGCGT TGGCTTGCTG ATGCTGGCGG TGTCGTGGAC CAGCGCCTGG
CGCCTTCGCC GCAATGGTGA ACTGCCGCGC TGGCTGGCGC GCACCCTCGT CGCCATGACG
TTCTCCGGCT GGGTGGCGGT GGTGGCCGGC TGGTACGTGA CCGAGATCGG CCGGCAACCG
TGGCTTGTCT ACGGCGTGCT GACCACCGCG CAGGCCGCCT CATCCGTGCC CGCGCGGATG
ATCGGCAGCA CGCTGGCGAT GTATCTCGCG CTGTACGCGT TCCTCATCGC CTCCTACATT
GGCGTGGTGT TCTATCTGGC CCGCAAGGCC GGCGGCGCCA TCGACCCGAC CGATGCCGAC
ATCCCCGGCA AGCACACCTC TGAACTTTCC GCGCCCGTCG CGAGCCACGC ATGA
 
Protein sequence
MSLDPVVLAR IQFGANITFH ILFPTISIAL AWVLLFFKLR YRKTGDEAWM AAYRLWVKVF 
ALTFALGVVS GVTMSFQFGT NWPGYMNTVG NIAGPLLAYE VLTAFFLEAS FLGIMLFGTG
RVSPRIHTFA TFLVALGTTI SVFWIIALNS WMQTPAGYVM IDGRAHPQSW LAIIFNPSFP
YRFTHMLLAS GLTVSFLLAG LSAYRWLRND RGGDVRAAHK TGVVLAAMLI PLQIAAGDAH
GLNTLEHQPA KLAAIEGIWQ TERGVPAVLF GIPDAATRSN RHEIAVPKVA SLYLTHSLDG
EVRGLDQFDQ HPPVLPVFFA FRLMVGVGLL MLAVSWTSAW RLRRNGELPR WLARTLVAMT
FSGWVAVVAG WYVTEIGRQP WLVYGVLTTA QAASSVPARM IGSTLAMYLA LYAFLIASYI
GVVFYLARKA GGAIDPTDAD IPGKHTSELS APVASHA