| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4156 |
|---|
| Symbol | |
|---|
| ID | 6285570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 424111 |
|---|
| End bp | 425040 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642618641 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_001892682 |
|---|
| Protein GI | 187926337 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATGA CCCCCCACCG ACATACCGCC TGGTTGGACT GGCTTGTCCT GAGTGCGCTG
CTGGTCGGCT TATGCCTGAG CCTCCCCGGG CGCGCGGCAG ACAACGCGCA AGGTTTGCGC
GACAAATACC AGAGCGTGGC GCCACAGTTG GCCGATAACG TGTTCCATCG CCCGCTGGTA
CTGGAATCCA CCGAAGCCCC CGACCGGCTC AAGAGCGACA TCTATAGCGT GCTCGACTAC
CCGTTTGCCA CCGTCAAGGG CGCGTTGGGC GACCCGGAGC ACGGTGCTGC CAACTGGTGC
GACGTGCTCA TCCTGCATCT GAATATCAAG TACTGCCACG CCACGCACGG CGCAGACAGC
AGCGTGCTCA ACGTGAACCT CGGCCGCAAG GTAGAAGACT CGCTTTCCGC CAGCTATCGC
CTTGAGTTTG GTTATCACCC TGTTGTCAGC AGTGCGGATT ACTTTCGCGT TGAACTCAGC
GCGGCTTCCG GCCCGCTCAG CACCCGCGAC TACCACATCA TGCTGGAGGC CATTCCCGCG
CCGGGCACTG GCAACCACAC GTTTCTGCAC CTGACCTACG CTTATGGTTA CGGCGCGGCC
GGTCGACTGG CGATGCGCAC GTACCTTGCA ACCGTGGGCA GCGGCAAGGT CGGGTTCACC
AAGACGGCGG AATCGTCGCC GGGTGCGGAG CCCGAATTCG TGGGCGGCGT GCGCGGCCTG
CTTGAGCGCA ACACGATGCG CTACTACCTC GCCATCGATG CGTATCTGAA GTCGCTGTCT
GCGCCGCCGG ACAAGCGTTT GCAGCAGCGG CTGAACACGT GGTTCAACGC CACCGAGCAG
TACGCACGCC AGTTGCACGA AGTGGAGCGG CAGGACTACC TGCAGATGAA GCACCACGAA
GTCGAGCGCC AGCAGCAGGC GGCGCAGTAG
|
|---|
| Protein sequence | MPMTPHRHTA WLDWLVLSAL LVGLCLSLPG RAADNAQGLR DKYQSVAPQL ADNVFHRPLV
LESTEAPDRL KSDIYSVLDY PFATVKGALG DPEHGAANWC DVLILHLNIK YCHATHGADS
SVLNVNLGRK VEDSLSASYR LEFGYHPVVS SADYFRVELS AASGPLSTRD YHIMLEAIPA
PGTGNHTFLH LTYAYGYGAA GRLAMRTYLA TVGSGKVGFT KTAESSPGAE PEFVGGVRGL
LERNTMRYYL AIDAYLKSLS APPDKRLQQR LNTWFNATEQ YARQLHEVER QDYLQMKHHE
VERQQQAAQ
|
|---|
| |