Gene Rpic_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4112 
Symbol 
ID6285498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp382967 
End bp383857 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID642618599 
ProductNmrA family protein 
Protein accessionYP_001892640 
Protein GI187926295 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.864196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.177288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTCA TCTTTGGGGC ATCGGGCAAA GTCGGACACG CGACCGCCGT AGCGCTGCGC 
AATGCGGGGC GGCCTGTGCG GGCGGTCGTG CGCGGTGCGC GGCAAGGCGA AGCGCTGGCC
AGAATCGGCT GCGAGATTGC GATCGCCGAT CTGACCGATC CGGCCTCCGT TGCTTCCGCC
ATCAAGGGCG CGACGGCTGT GCAGATGTTG TGTCCAGTGC CGGTGGGCGA CGTTGACCCC
GCCTTCACCA TGGAGCGCAT GATCGACGTA GCCGCCGATG CGCTGCGCGC CAACCCGCCA
TCGGCTGTCC TGGCCCTGTC GGACTACGGC GCCGAGCTGG ACCGGGGCAC CGGCCTGACG
CGGTTGTTCC ATCTGCTGGA AGAGCGGCTC AAGCCGCTGG CGACGCACCT GACGCTGCTG
CGCTCAGCGG AGCATGCGCA GAACTGGGCG GCGATGCTGC CCGTCATGCT GGCGACCGGG
CGGCTGCCGA GCCTGCACTA TCCGCTGGAT CGCGCGTTTG CGACCGTCGC CACGCAGGAC
GTAGGCGCGC TGGCCGCCCA GTTGCTACTC GATGGGCCAT CGGCCAACAC ACCTCGCATC
GTCAGCGTGG AAGGCCCGCG CCGTGTGAGC CTGATCGACG TCGCACGCGC GTTCAGCGCT
GTCGTCGGCC GCGAGATTGT TGCCGACGCC GTGCCGCGCA CCGCCTGGTC GCCGATGCTG
CAGCGTGCCG GTCTGAGCGC GAACCATGTG CAACTGCTCA CCGAACTCTA CGATGCGGTC
AACGCCGGGC AGATCGACGT GGAGAAAGGC GTGTCGGAGC AGCGTTTCGG CAAGACCGAG
CTGCACGATG TGTTTGCCTC GCTGCTCGCG ACGCACATGA GCTCGAGCTA G
 
Protein sequence
MFVIFGASGK VGHATAVALR NAGRPVRAVV RGARQGEALA RIGCEIAIAD LTDPASVASA 
IKGATAVQML CPVPVGDVDP AFTMERMIDV AADALRANPP SAVLALSDYG AELDRGTGLT
RLFHLLEERL KPLATHLTLL RSAEHAQNWA AMLPVMLATG RLPSLHYPLD RAFATVATQD
VGALAAQLLL DGPSANTPRI VSVEGPRRVS LIDVARAFSA VVGREIVADA VPRTAWSPML
QRAGLSANHV QLLTELYDAV NAGQIDVEKG VSEQRFGKTE LHDVFASLLA THMSSS