Gene Rpic_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3960 
Symbol 
ID6285199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp217956 
End bp218375 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID642618451 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001892492 
Protein GI187926147 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATC ACTGCCTGTA CTTCAACACC ACCGCTCTGG CGCGCTCGGT CGAGCGCGAA 
TGGACGGTCG CGTATGCGCC GTTCAGCCTG ACGCCGCCGC AAGGGTTCGT GCTGCGCGTG
GTGCTCAAAC GACCCGGCGT GCTCAACCGC GAACTGGCCG AGGTGCTGGG CATTGCGCGG
CCCACTGCCA CGCGTCTTGT GGACGGCTTG ATCGCCAAGG GCCTGGTGGA ACGCCAACCT
TCTGCAGAGG ACGGCCGAGA GTGGAACCTC TTCCCCACGG AAGCCGCCCG TGAACTGGAA
ACCGCGTTGC AGGCCGCCAG CGCCAAGGTG GCGCGGCGCT TGCGCGAGCA TGTCGGCGCA
AGCGCGTTCG ACGATACGGT GCAGGCCATC CGTAACGTTC GGAGTACGCT GAACACGTAA
 
Protein sequence
MFDHCLYFNT TALARSVERE WTVAYAPFSL TPPQGFVLRV VLKRPGVLNR ELAEVLGIAR 
PTATRLVDGL IAKGLVERQP SAEDGREWNL FPTEAARELE TALQAASAKV ARRLREHVGA
SAFDDTVQAI RNVRSTLNT