Gene Rpic_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3948 
Symbol 
ID6285174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp204752 
End bp206617 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content65% 
IMG OID642618439 
Productferrous iron transport protein B 
Protein accessionYP_001892480 
Protein GI187926135 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.648078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGC ACGCTTCTTC CTCCTCCGCT TCCACACCCG CATTGCGCGT TGCCCTGGTC 
GGCAACCCCA ACTGCGGCAA GACCGCGCTG TTCAACCTGC TGACGGGCAG CCGCCAGAAG
GTCGCCAACT ATGCGGGGGT GACGGTCGAG CGCAAGGAAG GGCGCTTTAC TGCGCCGTCG
GGCCGGCATG TGCAGATCCT TGATCTGCCC GGCGCCTACA GCCTGATCGC CACCAGCCCC
GACGAAGCCA TCACACGCGA TATCTGCCTT GGCACGTTCC GTGGCGAGTC GCGCCCGGAC
ATGCTGATCT GCGTGGTCGA CGCCACCAAC CTGCGCCTGC ACCTGCGCTT CGTTCTGGAG
CTGCAACGCC TGGGCTTGCC GATGGTGCTG GCGCTGAACA TGGTGGATGC GGCCGAGCGG
CGCGGCATCC GCATCGACCG CGCCAAGCTG GAAACCGCCC TGGGCGTGCC GGTGGTGCAG
ACAGTGGCCA TCAAACGCAA TGGCGCGGCT GACCTTGTCG CCCATATCGA TCACGAACAA
CTGCCGGCCG TCCCGGTCGG GCTGCCGGCT GATGCGGATC CGCACGTTGA AGTGAAGCGC
CTGCTGGATA CCGCTGTGAC CATGCCGCGC AGCACCGCCG AGCTGGACGA CCGGCTCGAC
CGTATCGTCC TGCATCCGGT GCTGGGCCTG ATGCTGCTGG CCGTGCTGAT GTTCTTCATG
TTCCAGGCGG TGTTCTCGTG GGCGCAGCCG CTCATGGACG GCATTCAGGG TGCCGTGGAA
GCCGTGGGCG TGTGGGTCGG CAATGTCATG CCCGACGGCA TGCTCAAAAG CCTGCTGGTG
AACGGCATCA TCGCGGGCAC GGGCAGCGTG CTGGTGTTCC TGCCGCAAAT CCTGATCCTG
TTCCTCTTCA TCCTGTCGCT GGAAGAATCG GGCTATCTGC CGCGCGCGGC CTTCCTGCTC
GACCGGTTGA TGGCGGGCGC GGGGTTGTCG GGGCGCTCGT TCATTCCGCT GCTGTCGAGT
TTTGCGTGCG CGATCCCCGG CGTGATGGCC ACGCGCACGA TTCAGGACCC GCGCGACCGG
CTGGTGACGA TTCTCGTGGC ACCGCTGATG ACGTGCTCGG CGCGGCTGCC CGTGTATGCG
CTGCTGATCG GCGCGTTCAT CCCGGTGCGG AAGGTGTGGG GCCTGTTCAA TCTGCAGGGG
TTGGTGCTGT TCGGGCTGTA CATGGCGGGC ATCGTATCGG CGCTGGTCGT GGCCTACGTG
CTCAAGTACC TGAAGCGCGA TCGCAACGAG CACCCGCTCA TTCTCGAACT GCCGTCGTAC
CGCCTGCCCA GCGTGCGCAA CCTGATCGTC GGCCTCGTCG AGCGTGCACG CATTTTCCTG
CGCCGCATCG GCACGGTCAT CCTCAAGATG ATGGTGCTGC TGTGGTTCCT CTCGACGTTC
CCGGCGCCGC CGGCCAACGC CACGCTGCCG GCCATCGATT ACAGCTTTGC CGGGATGATC
GGCCGTGCGC TTGAAGTCGT GTTCGCGCCG ATCGGCTTCA CGTGGCAGAT GTGTATTGCG
CTGATCCCGG GCATGGCGGC ACGTGAGGTG GCCGTGGGCG CGCTGGCGAC GGTGTACTCG
CTGTCGGCAA CGCATGAAGA TGCGGCTGCG CAGCTGGCGC CGATCATCTC GCAGCAATGG
TCGCTGGCCA CGGCATTGGC CTTCCTGGCT TGGTACGTCT ACGCGCCGCA GTGCATCTCG
ACGCTGGCCA CCATCCGCCG CGAGACCAAC TCGTGGAAGG TCATGGCGGG CACCGCCGGC
TACCTGTTCG CGCTGGCCTA CCTGGCCGCT TTCGCTACCT ACCAGATCGC ACGGGTGCTG
ACATGA
 
Protein sequence
MQMHASSSSA STPALRVALV GNPNCGKTAL FNLLTGSRQK VANYAGVTVE RKEGRFTAPS 
GRHVQILDLP GAYSLIATSP DEAITRDICL GTFRGESRPD MLICVVDATN LRLHLRFVLE
LQRLGLPMVL ALNMVDAAER RGIRIDRAKL ETALGVPVVQ TVAIKRNGAA DLVAHIDHEQ
LPAVPVGLPA DADPHVEVKR LLDTAVTMPR STAELDDRLD RIVLHPVLGL MLLAVLMFFM
FQAVFSWAQP LMDGIQGAVE AVGVWVGNVM PDGMLKSLLV NGIIAGTGSV LVFLPQILIL
FLFILSLEES GYLPRAAFLL DRLMAGAGLS GRSFIPLLSS FACAIPGVMA TRTIQDPRDR
LVTILVAPLM TCSARLPVYA LLIGAFIPVR KVWGLFNLQG LVLFGLYMAG IVSALVVAYV
LKYLKRDRNE HPLILELPSY RLPSVRNLIV GLVERARIFL RRIGTVILKM MVLLWFLSTF
PAPPANATLP AIDYSFAGMI GRALEVVFAP IGFTWQMCIA LIPGMAAREV AVGALATVYS
LSATHEDAAA QLAPIISQQW SLATALAFLA WYVYAPQCIS TLATIRRETN SWKVMAGTAG
YLFALAYLAA FATYQIARVL T