Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3902 |
Symbol | |
ID | 6285299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 149713 |
End bp | 150606 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618395 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001892436 |
Protein GI | 187926091 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.981327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATC TCAGGCGGTT GGACCTGAAC CTGCTGGTGA CACTCGATGT GCTGCTGACC GAGCACAACG TCACGCGTGC GGCCGAGCGG CTGAACTTCT CGCAGCCTTC CGTGAGCGTG CATCTGGCCA AGTTGCGAGA CATTTTTGGT GACCCGCTAC TGCTGCCCGG CCCGCGCGGC ATGCGCCCAA CCGCCCGCGC GGAAAGCTTG CGCGAACCGC TGCGGCTGGC GCTGGAAGCG CTGGAGCAGG CCGTCGCACC CGCCAGCCCG TTCGACCCGG CGCACGCCAC CAACACCTGG CGCGTGGCCG CCACGGACTA CGGCGAATCG ACCATCGCGC TGCCGGTGCT GAACACCCTG CGCACAAGCG CACCGGGCAC ACGGCTCGCC ATGCTGGGAC TGGTGCCCAC GCGTATTGAA AAGCAAGCCG AGCAAGGGGA GATCGACCTC GCGTTCCACA CCACAGACGG CGCGCCACCC GGCCTGCGCC GCCGTGCGCT CTTCACTGAA CGCTATGTGT TGATCGGCCG CGCGGGGCAC CCGCGCCTGA AGCGCAGGCC GACACTGGCG CAGTTTTGCA CGCTCGATCA CGTGATCGTG TCGCCCGATG GCGGTGGCTT CTTCGGCGTG ACGGACGAAG CCCTGGCGGC AGCCGGTGCC ACGCGACGCG TAGTGCTGTC GGTGCCGCAC TTCCTCTTTG TGATGACAGC GGTGGCAAGC ACTGACATGG TCGCCATGCT GCCCGAGCGG CTGGTGCGCG GGGCCAGTGC GCTACAGGCG GTTGAACCGC CGGTGGAGGT GCCAGGCTAT GAGATGTCGA TGCTGTGGCA TGAGCGCGTG CATCGAGACC CCGGGCATCA GTGGTTGCGT GATGTGATTG CAGGCGCGGT CTGA
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Protein sequence | MNNLRRLDLN LLVTLDVLLT EHNVTRAAER LNFSQPSVSV HLAKLRDIFG DPLLLPGPRG MRPTARAESL REPLRLALEA LEQAVAPASP FDPAHATNTW RVAATDYGES TIALPVLNTL RTSAPGTRLA MLGLVPTRIE KQAEQGEIDL AFHTTDGAPP GLRRRALFTE RYVLIGRAGH PRLKRRPTLA QFCTLDHVIV SPDGGGFFGV TDEALAAAGA TRRVVLSVPH FLFVMTAVAS TDMVAMLPER LVRGASALQA VEPPVEVPGY EMSMLWHERV HRDPGHQWLR DVIAGAV
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