| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3871 |
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| Symbol | |
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| ID | 6285875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 123313 |
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| End bp | 124284 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642618369 |
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| Product | DNA topoisomerase type IA zn finger domain protein |
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| Protein accession | YP_001892410 |
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| Protein GI | 187926065 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1715] Restriction endonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.821723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGGA GGAGAAAACA AGCATCCACC AGCGACGTGC TGTTGGCGCT GCCGTGGTGG
ATGCTGGCCC TTGGCGCGGC GGCCAGTTAT CTGATTTTTC ACAACATCCT CCCGGCGGCG
TTTAGCGCCA ATCCGCTGTT GAGCGGCGTC GGGATGTTGG CGCGCGGGCT GGCCTGGATG
CCCGCGCTGC TGCTCGGCTT CTTTGCCGTG CTGTCGTACT TGCGGGAGCG CAGCCAGCAG
GCCGATGCCC GGCTCGGCCC CCCGCGCACT GAACCGACTG GGCGATCCCG CCCGCCGAAG
GCGCCGCCCC AGCCCGCCCG CAACGCAGCG GGCAGCATCA CGCCCAACCC GCCTCATCCG
ACTCGCAACA CCCCCACCCC CCCACAAGCC GCCACGCCGG CAGAACCCGC CCCGCCCCAA
AGCTGGACGC TGGAGGCCAT CCACGCACTT GAGTGGAAGC GGTTCGAGCT GCTGTGCGTG
CAGTACTACG AGCAGATGGG CTTCACGGTG AAGACGGTGC CGCACGGCGC AGACGGCGGC
ATTGACGCCA CGCTGTACAT GGCTGGCCAG AGCGCGCCCG TGGCGGTGGT CCAGTGCAAG
GCGTGGTCCA AGCCCGTGAA GGTGGAGCAG GTGCGGGCGC TGGGCGGCTC CATGCTGGCG
CACAAGGTCA AGCGGGGCGT GTTCTGGTCT TTGTCCGGTT ATGTCGGCAA CCCGGTGCAG
GAGTATTCCG AGCTTGCCGG TATCCAGCTA TTGGACGGGC CGGCGGTGCT TGAGCGCATC
CGCGCGCTGG CCGAAGACAA GCAGGCCGCG CTGCTGGCGA AGGTGTTTGA GGGGGATTCC
CGAACGCCTT CGTGCCCGGC TTGCGGGGTG AAGCTGGTGG CGCGGAATGG GAAGAGTGGG
GCGTTTTGGG GGTGTAGCAA TTTCCCTAAG TGTTGGAATC GATTGGAGAT GAAGCACGGC
GTGTCTATGT AG
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| Protein sequence | MGRRRKQAST SDVLLALPWW MLALGAAASY LIFHNILPAA FSANPLLSGV GMLARGLAWM
PALLLGFFAV LSYLRERSQQ ADARLGPPRT EPTGRSRPPK APPQPARNAA GSITPNPPHP
TRNTPTPPQA ATPAEPAPPQ SWTLEAIHAL EWKRFELLCV QYYEQMGFTV KTVPHGADGG
IDATLYMAGQ SAPVAVVQCK AWSKPVKVEQ VRALGGSMLA HKVKRGVFWS LSGYVGNPVQ
EYSELAGIQL LDGPAVLERI RALAEDKQAA LLAKVFEGDS RTPSCPACGV KLVARNGKSG
AFWGCSNFPK CWNRLEMKHG VSM
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