Gene Rpic_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3799 
Symbol 
ID6284888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp44225 
End bp45223 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content68% 
IMG OID642618300 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_001892342 
Protein GI187925997 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0978462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCCA GGTTGATCCA ACTCGGTGAA CCCGGTCCAG CACTGGGGTT ACAGCCAGCG 
GACCAGATGC TTCCGCCGCC CGGCGCGAAT GTGCTGACGG TGCGGCACAC CGCCGTGGGC
GTGAACTTTG TCGACGTGTA TCACCGCACC GGCCTCTATC CCGTGCCGGC ATTTCCGGCG
GTGCTCGGTG TCGAGGGCGT CGGCGTGGTG GAAGCCGTGG GCACCGACGT ACGTGGCTTT
GTCGTAGGCC AGCGCGTGGC GTGGGCCGGA CTAATGGATG GTGCTCCCGG CGGCTACGCC
AGCCATCGCA ACATTCCCGC CAACCGCGCA ATTGCCTTGC CCGATGCGCT GGACGACGAA
ACCGTTGCCG CCACGCTGCT GCGTGGCATC ACCGCACACA TGTTGCTGAC GCGCGTTCGG
CAGGTTGGCG TGGGTGACAC GGTGCTGGTG CACGCAGCAG CAGGAGGCCT GGGCGTGCTC
CTCGTGCAAT GGGCAAAGCG CCTGGGCGCA CGCGTGATCG GCACGGTCGG TAGCGAAGCC
AAGGCAGCGA CAGCGCTTGG CCACGGAGCA GACCACGTCG TGCTGCACCG CCAGCAGGAT
GTGCGCGAGG CTGTGCTGCA ACTGACGGCA GGTGAGGGCG TCGACTATGT CATCGACGGG
GTCGGCGGGC CGATGCTGCA GACGTCCCTG GCTGTGACGC GGCCGTTCGG CATGGTCGCA
AGCATCGGTC AGGCTGGCGA CGTGAGCAAC GTGCAGACGA GCGCCGTCGA TCTTGCCGCG
CTTGGGCCGT CGCGTTCGAT TGCACTGGCA CGGCCGGGCG TGTTCCGCTA CATGACGGAT
CTGTCGCGCT ACCGGGTGGG TGCGCAGGCA GCGCTGCAGC GCATGCTGGA GGGCGTGCGT
GTGCCGGTGG GCGGCATCTA CGCGCTGGCT GACGCGGCCG CCGCGCACGC GGCGCTCGAG
GGCGGGCGCA CGTCGGGCGC GTTGCTGCTG CGTCCTTGA
 
Protein sequence
MHARLIQLGE PGPALGLQPA DQMLPPPGAN VLTVRHTAVG VNFVDVYHRT GLYPVPAFPA 
VLGVEGVGVV EAVGTDVRGF VVGQRVAWAG LMDGAPGGYA SHRNIPANRA IALPDALDDE
TVAATLLRGI TAHMLLTRVR QVGVGDTVLV HAAAGGLGVL LVQWAKRLGA RVIGTVGSEA
KAATALGHGA DHVVLHRQQD VREAVLQLTA GEGVDYVIDG VGGPMLQTSL AVTRPFGMVA
SIGQAGDVSN VQTSAVDLAA LGPSRSIALA RPGVFRYMTD LSRYRVGAQA ALQRMLEGVR
VPVGGIYALA DAAAAHAALE GGRTSGALLL RP