Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3796 |
Symbol | |
ID | 6284885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 41560 |
End bp | 42357 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618297 |
Product | ABC transporter related |
Protein accession | YP_001892339 |
Protein GI | 187925994 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.477228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.17284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAAC TCACCTCCAT TTCCAAGCGC TTTGGCGGCC TGTCGGTGCT GCAGGACGTC AACATTGAAG TGCCGCAAGG CACCATCTTC GGCTTGATCG GCCCGAACGG CGCCGGCAAG ACGACCGTCT TCAACCTGAT CACCGGCCTG CTGGCACCCA CGGGCGGCTC GCTGACGTTC AACGGCGAAA ATCTTGTCGG CAAGAAGCCG CACCAGATCA CGCAGATGGG CATCGCGCGC ACGTTCCAGA ACATCCGCAT CTTCAAGGAG ATGACGCTGC TGGAGAACGT CGTGGTGGGC ATGCACCGGC ATCTGGACTA CGGTGCACCG GGCCTGCTGC TGTCGCTGCC CAAGTACCGC GCTGCCGAGC GCCGCGCGCG CGACCGTGCA CTGGAGCTGC TCTCGTGGGT CAAGCTCGAT CACAAGGCGC ACGACATTGC CGACAACCTC TCGTACGGCG ACCAGCGCAA GCTCGAGCTC GCGCGGGCGC TGGCCACCGA GCCCAAGCTG CTGTTGCTCG ACGAGCCCGT CGCTGGCATG AACACCGGCG AGAAGGTCGA CCTGATGGCC GAGATCGAGA ACATCAAGGC GCGCGGCTAC ACGATCTTCA TGATCGAGCA CGACATGCGC TTTGTGATGG GCCTGTGCGA GCGCATTGCG GTGCTCAACT TCGGCCGCAT CATCGCCGAA GGGCCGCCGG AGGCCATTCG CAACAACCCG CAAGTCATCG AAGCCTATCT CGGCCGGGAC GACGACGAGG CGGACGGTTC TGCTGCCGCA GAGAAGGAGA CGGCATGA
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Protein sequence | MLKLTSISKR FGGLSVLQDV NIEVPQGTIF GLIGPNGAGK TTVFNLITGL LAPTGGSLTF NGENLVGKKP HQITQMGIAR TFQNIRIFKE MTLLENVVVG MHRHLDYGAP GLLLSLPKYR AAERRARDRA LELLSWVKLD HKAHDIADNL SYGDQRKLEL ARALATEPKL LLLDEPVAGM NTGEKVDLMA EIENIKARGY TIFMIEHDMR FVMGLCERIA VLNFGRIIAE GPPEAIRNNP QVIEAYLGRD DDEADGSAAA EKETA
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