| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3796 |
|---|
| Symbol | |
|---|
| ID | 6284885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 41560 |
|---|
| End bp | 42357 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618297 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001892339 |
|---|
| Protein GI | 187925994 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.477228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.17284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAC TCACCTCCAT TTCCAAGCGC TTTGGCGGCC TGTCGGTGCT GCAGGACGTC
AACATTGAAG TGCCGCAAGG CACCATCTTC GGCTTGATCG GCCCGAACGG CGCCGGCAAG
ACGACCGTCT TCAACCTGAT CACCGGCCTG CTGGCACCCA CGGGCGGCTC GCTGACGTTC
AACGGCGAAA ATCTTGTCGG CAAGAAGCCG CACCAGATCA CGCAGATGGG CATCGCGCGC
ACGTTCCAGA ACATCCGCAT CTTCAAGGAG ATGACGCTGC TGGAGAACGT CGTGGTGGGC
ATGCACCGGC ATCTGGACTA CGGTGCACCG GGCCTGCTGC TGTCGCTGCC CAAGTACCGC
GCTGCCGAGC GCCGCGCGCG CGACCGTGCA CTGGAGCTGC TCTCGTGGGT CAAGCTCGAT
CACAAGGCGC ACGACATTGC CGACAACCTC TCGTACGGCG ACCAGCGCAA GCTCGAGCTC
GCGCGGGCGC TGGCCACCGA GCCCAAGCTG CTGTTGCTCG ACGAGCCCGT CGCTGGCATG
AACACCGGCG AGAAGGTCGA CCTGATGGCC GAGATCGAGA ACATCAAGGC GCGCGGCTAC
ACGATCTTCA TGATCGAGCA CGACATGCGC TTTGTGATGG GCCTGTGCGA GCGCATTGCG
GTGCTCAACT TCGGCCGCAT CATCGCCGAA GGGCCGCCGG AGGCCATTCG CAACAACCCG
CAAGTCATCG AAGCCTATCT CGGCCGGGAC GACGACGAGG CGGACGGTTC TGCTGCCGCA
GAGAAGGAGA CGGCATGA
|
|---|
| Protein sequence | MLKLTSISKR FGGLSVLQDV NIEVPQGTIF GLIGPNGAGK TTVFNLITGL LAPTGGSLTF
NGENLVGKKP HQITQMGIAR TFQNIRIFKE MTLLENVVVG MHRHLDYGAP GLLLSLPKYR
AAERRARDRA LELLSWVKLD HKAHDIADNL SYGDQRKLEL ARALATEPKL LLLDEPVAGM
NTGEKVDLMA EIENIKARGY TIFMIEHDMR FVMGLCERIA VLNFGRIIAE GPPEAIRNNP
QVIEAYLGRD DDEADGSAAA EKETA
|
|---|
| |