| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7209 |
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| Symbol | |
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| ID | 6278773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3595872 |
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| End bp | 3596645 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618229 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001890865 |
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| Protein GI | 187921833 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTG TGGTGTTGGT AACGGGCGCT TGCGGCGGCA TCGGCAGCGT GTTGTGCAAG
CGCTTCGTGG AGCAGGGCGA TACCGTGCTG GCGCTCGACA TCGACGCCGC CGCGCTGAAA
GCTTTGAGCG AGCAGCTCGG CGAGGCGCAC GTCACGCCGA TCGCGGTCGA TCTCGGCGAC
GCCGCCGCAG TGCAGCAAGC GGTGGCCGCC GCGGTCGAAC TGCGCGGTCC GGTCGATGTG
CTGGTCGCCA ACGCGGGCGC GGCCGAAGGT CTCACGCTCG CCACGACCGA TGTCGCGAGC
TGGCAGCGCG ACATCCATCT GAATCTGAAC GGCACGTATC ACACGGTTGA AGCGGTGCGC
GCGTCGATGA TCGAGCGGCA GCAGGGCGCG CTCGTGCTGA TCGGTTCGGT AAACGGCATG
GCCGCGCTCG GTCATCCGGC GTACAGCGCG GCGAAGGCCG GGCTCATCAG TTATACGAAA
GCGCTCGCGC TCGAACTAGG CCGCTACGGC ATTCGCGCGA ACATCGTGTG CCCGGGCACC
GTGAAGACGC AGGCGTGGCA GGCGCGCGTC GACAAGAACC CGCAGGTCTT CGAAGATCTG
AAAAAGTGGT ACCCGTTGCG CGACTTCGCG ACGCCCGACG ACATCGCCGA CGCGGTGCTG
TTTCTGGCCT CGCCGATGGC GCGTGTGATT ACCGGCGTCG CGCTGCCGGT CGACGGCGGC
CTGATGGCCG GCAACCGTTT GATGGCGGAA GAACTGACAC TCGAGTCGCT CTGA
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| Protein sequence | MNRVVLVTGA CGGIGSVLCK RFVEQGDTVL ALDIDAAALK ALSEQLGEAH VTPIAVDLGD
AAAVQQAVAA AVELRGPVDV LVANAGAAEG LTLATTDVAS WQRDIHLNLN GTYHTVEAVR
ASMIERQQGA LVLIGSVNGM AALGHPAYSA AKAGLISYTK ALALELGRYG IRANIVCPGT
VKTQAWQARV DKNPQVFEDL KKWYPLRDFA TPDDIADAVL FLASPMARVI TGVALPVDGG
LMAGNRLMAE ELTLESL
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